Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0456 ATGTTGTGCTGCGGAGGTGCAGAGGAGGAGAGCAGCGGCCCTCCGGCCAGCCAATACACTGCACCACCTAGAGGAGGTAGTACATATGGTGAAGGAGGAGGCAATGACAGAGCAGAGCCAAGGAGCAATGCTGTTAAAAGTGGTGGCCCACAGAAAGTATTACCAATTGAGATACCCTCTATACCACTGGTTGAGTTAAATAGCTTAACTGGTAACTTTGGTGACAAGTCTTTCATCGGAGAAGGTTCCTATGGAAGGGTATTCTATGCAAAATTGAGTAACGGTACCGATGCTGCAATCAAGAAGCTAGATGCTTCTTCGACAGAACCCGACGACGATTTTGCTAATCAGCTCTCAATTGTTTCAAGACTGAAGCATGAAAATTTTGTGGAGTTGATTGGATATTGTCTTGAGGCAAACAACCGAATTTTGGTTTATCGGTATGCAAGTATGGGATCATTGCATGATGTGTTACATGAGGTCATGCGTTCAAATTCTAGAAACAGCCTTTTCGCTTGCGTGGGCGGCTGCGCTATTGCTATTGCAGGAAGGAAGGGTGTACAAGGGGCTGAACCTGGTCCAGTTTTAAGCTGGAACCAGAGAGCCAAAATTGCATTTGGTGCAGCAAAAGGACTTGAGTTTCTTCATGAAAAGGCTCAACCTTCTATAGTTCATCGTGACGTTAGATCCAGCAATGTCTTATTGTTCAATGACTACGAGGCCAAGATTGCAGATTTTAGCCTGACAAATCAGTCTTCCGACACAGCAGCTCGGCTACATTCGACAAGGGTCTTAGGAACATTTGGTTATCATGCTCCAGAGTATGCCATGACTGGGCAAATAACACAAAAAAGTGATGTATACAGTTTTGGTGTTGTACTTTTAGAACTCTTAACAGGAAGAAAACCAGTAGATCATACAATGCCAAAAGGGCAACAAAGTCTTGTAACTTGGGCAACTCCAAGGCTGAGTGAGGACAAAGTGAAACAATGTGTGGATCCTAAGCTAAGCAGTGACTACCCACCTAAGGCAATTGCAAAGTTGGCAGCAGTTGCAGCACTTTGTGTTCAATATGAAGCTGACTTCAGGCCAAACATGACCATTGTTGTGAAAGCTCTTCAGCCACTTCTGAATGCAAAACCAGCTGGTCCTGACTCCAATGCTTGA 1167 0.4464 MLCCGGAEEESSGPPASQYTAPPRGGSTYGEGGGNDRAEPRSNAVKSGGPQKVLPIEIPSIPLVELNSLTGNFGDKSFIGEGSYGRVFYAKLSNGTDAAIKKLDASSTEPDDDFANQLSIVSRLKHENFVELIGYCLEANNRILVYRYASMGSLHDVLHEVMRSNSRNSLFACVGGCAIAIAGRKGVQGAEPGPVLSWNQRAKIAFGAAKGLEFLHEKAQPSIVHRDVRSSNVLLFNDYEAKIADFSLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLSSDYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPAGPDSNA 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0456 388 SMART tyrkin_6 73 373 IPR020635 GO:0004713|GO:0006468
Lal18g0456 388 PANTHER OS03G0226300 PROTEIN 171 387 - -
Lal18g0456 388 PANTHER OS03G0226300 PROTEIN 1 160 - -
Lal18g0456 388 Pfam Protein tyrosine and serine/threonine kinase 78 373 IPR001245 GO:0004672|GO:0006468
Lal18g0456 388 Gene3D Transferase(Phosphotransferase) domain 1 150 383 - -
Lal18g0456 388 SUPERFAMILY Protein kinase-like (PK-like) 52 373 IPR011009 -
Lal18g0456 388 ProSitePatterns Tyrosine protein kinases specific active-site signature. 223 235 IPR008266 GO:0004672|GO:0006468
Lal18g0456 388 Gene3D Phosphorylase Kinase; domain 1 40 148 - -
Lal18g0456 388 MobiDBLite consensus disorder prediction 1 51 - -
Lal18g0456 388 PIRSF ILK 190 381 - -
Lal18g0456 388 PIRSF ILK 46 170 - -
Lal18g0456 388 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 160 - -
Lal18g0456 388 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 171 387 - -
Lal18g0456 388 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Lal18g0456 388 ProSiteProfiles Protein kinase domain profile. 73 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0456 Lal-Chr18 3744891 3752874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0456 37 380 Receptor kinase-like Gene Family AT3G58690 40.517 7.51e-84 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lal18g0456 PK_Tyr_Ser-Thr 7.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0456 - - gmx:100812507 643.654