Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0452 ATGTTCCACTTTCGTAAACTTAGATTAACGTTCACATTTCCCATTTTCAATTTTTCCCCAAAAACCCACCTTAAACCCTCACAAAACCCTAGATTTCTTCAAACCACGAAAAATTCACCAATTCTTCAATCCGAAAAGAAATTCACCCCAACAACTATCAGAGAAGCGCAATCTGCATTGCTTGAGTACTTGCATTCCACAAGAAGTTTGCAATTCACAGATGCAGATAACATATGCAAAAATTCCCCTTTTTTCATTCAGGATCTTCTCAGAAAAGTTAAAATCCGAAAGGAAAGTGTATCAGATATGAAGAAATCCATTTCAAGGTACCTATGTTATCACCCAATTAATGAATTTGAACCCTTTTTCGAAAGCATGGGTTTGAGGCCTTCGGAATATGTTTGTCTTCTTCCGAAAGACATGATTTTTCTTAACGATGATGTGGTTTTGATGGAGAATTATCATACTTTGTGTAACTATGGTGTTCCACGGAATAAAATGGGGATGATTTTTAAGGAAGCACCGCAGTTGTTTCGTTATGAAAACGGGGTTTTGTCGAAGAAGATTCAGGCTTATGAAAACCTTGGGGTTGCGCCCTCGACGTTAGTGAAAGTTGTTACTTTGAGTCCTTCTCTTTTGGTTGGGGATGTTAATGTTCAGTTTGTTAAGGTTGTGGATAAGTTGAAGGGTCTTGTTGCAAAGGGTGGTAGCGATTGGATCGAGCGGCATTTGTTGGATTGTAATTGGGGTTTGATGCTTGAGCTATTGTGCTTGCTTGGCAAGGTTTGTAGTGAGGAACAGTTGGGCGACGTCATTCACAACCACCCTCGTGTTGTAGAATCGGGAGGTACGACACTGTCATTGATTGGGTTCTTGTTGAAATTTGGGTTGTCTGTGAAACAGATATGTCTTGTGTTTCTCGAGTTTCCGCAGATTCGGGCTGACCAGTTTCTGAAAAACTTGAGACAGTGTTTTGTGTTCTTGAACGAAATTGAGATGCAGGCTGCAGAGATTGGAAAGATTTTCCAGTCTCACTCTTTAATGCTGGGTTCTTCCACATTAAAGAAAACAAATAGTTTACTTTGTAACTTGAATGTTGGTAAGAAGCGATTATGCAGATTCGTAGAGGAGAACCCTCAAGAAATCAGGAATTGGGCTGTTGGAATGAAGGTTCAGCCTCTTGAGAACTCAAATGAAGATCAAATATCGAAGGAGCACAAGATAGAGTTCTTGCTGGGGTTGGGATATGTGGAAAACTCAGAAGAAATGAAAAAGGCGTTTAAGCTGTTCAGAGGGAGGGGAACCGAGCTTCAGGAGAGATTTGATTTTATTGTTGAAGCTGGCTTGGATTGTGAAGTTGTCCGGGAAATGATCACAGTTTACCCTCAGATTCTTAATCAGAGCACAGATAGGATTAACTTTAAAATTGAGCTACTTGTAAAGGAAGGATATCCTATATCAAGCTTAGTGAATTTCCCATCTTTTCTTTCCTATACACCAGGAAGAGTTAAGCTTAGGTTATCAATGTATAATTGGCTCAAAGACCATGGGGCTGCAGATCCCGGGCTTAGTTTGAGCACTGTAATCGCATGCTCTGAGAAAGTATTTGTGAAGCAGTATGTAAATCGGCATCCATCTGGCCCTCAAGCTTGGCAGGATTTAAAGGCACAAATTCCTTTTGAATAA 1686 0.4015 MFHFRKLRLTFTFPIFNFSPKTHLKPSQNPRFLQTTKNSPILQSEKKFTPTTIREAQSALLEYLHSTRSLQFTDADNICKNSPFFIQDLLRKVKIRKESVSDMKKSISRYLCYHPINEFEPFFESMGLRPSEYVCLLPKDMIFLNDDVVLMENYHTLCNYGVPRNKMGMIFKEAPQLFRYENGVLSKKIQAYENLGVAPSTLVKVVTLSPSLLVGDVNVQFVKVVDKLKGLVAKGGSDWIERHLLDCNWGLMLELLCLLGKVCSEEQLGDVIHNHPRVVESGGTTLSLIGFLLKFGLSVKQICLVFLEFPQIRADQFLKNLRQCFVFLNEIEMQAAEIGKIFQSHSLMLGSSTLKKTNSLLCNLNVGKKRLCRFVEENPQEIRNWAVGMKVQPLENSNEDQISKEHKIEFLLGLGYVENSEEMKKAFKLFRGRGTELQERFDFIVEAGLDCEVVREMITVYPQILNQSTDRINFKIELLVKEGYPISSLVNFPSFLSYTPGRVKLRLSMYNWLKDHGAADPGLSLSTVIACSEKVFVKQYVNRHPSGPQAWQDLKAQIPFE 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0452 561 SMART mt_12 455 485 IPR003690 GO:0003690|GO:0006355
Lal18g0452 561 SMART mt_12 269 298 IPR003690 GO:0003690|GO:0006355
Lal18g0452 561 SMART mt_12 339 367 IPR003690 GO:0003690|GO:0006355
Lal18g0452 561 SMART mt_12 168 198 IPR003690 GO:0003690|GO:0006355
Lal18g0452 561 SMART mt_12 420 450 IPR003690 GO:0003690|GO:0006355
Lal18g0452 561 SMART mt_12 203 234 IPR003690 GO:0003690|GO:0006355
Lal18g0452 561 SMART mt_12 486 519 IPR003690 GO:0003690|GO:0006355
Lal18g0452 561 Pfam mTERF 406 536 IPR003690 GO:0003690|GO:0006355
Lal18g0452 561 Pfam mTERF 88 231 IPR003690 GO:0003690|GO:0006355
Lal18g0452 561 Pfam mTERF 263 472 IPR003690 GO:0003690|GO:0006355
Lal18g0452 561 Gene3D Transcription termination factor 3, mitochondrial 284 553 IPR038538 -
Lal18g0452 561 PANTHER CGI-12 PROTEIN-RELATED 43 555 IPR003690 GO:0003690|GO:0006355
Lal18g0452 561 PANTHER MITOCHODRIAL TRANSCRIPTION TERMINATION FACTOR-RELATED 43 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0452 Lal-Chr18 3724497 3726182 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lal18g0452 mTERF 1.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0452 - - lja:Lj1g3v4317450.1 689.493