Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0410 ATGGATGCAAAAGATATTCTAGGATTGTCGAAGAACTCATTCCCAGCTTTGGAGAAGAAATCTCGACCTCACAAAGAATCTCAGAGGAAACCAGATGGCATTTCGCGTGAGGTGTATGCACTTACTGGTGGATTATCATCTCTTATGCCTGCAATTGATGCCTCTCATTTGAAAAAAAGGCCCCCTTCTGACGAAAAGATCACTTGGCAATGGCTTCCTTTTACCAGTTCAGCTCGTAAGGATAATCTTCAACTATACCATTGGGTTCGTGTCGTCAATGGTGCTCCCCCAACGGGGGACTATTCTTTTGCGAAGTATAACAAGTCTGTTGGCATTGTCAAATACACAGAGGAGGAGTATGAGAAGCATTTGAATGATCCTATGTGGACTAAGGAAGAGACAGACCAACTATTTGATTTCTGTGAGAGGTTTGATCTCCGATTTGTTGTAATAGCTGATAGGTTTCCGTCATCTCGGACTGTAGAGGAATTAAAGGATCGATATTACAGTGACTGTAGAAGTAAATTTGAGATATTGAACTTTATTCTTGATTACATTCCCTCATACCATGTAGTATGTCGGGCTATATTAATTGCTAGAGCTCCATCTTCTGGGGATGTTGCAGCAAATCCTCTTGTTAAGGAACCGTATAATGTTTCACAAGAGATAGAGAGAAAACGAGCACTGTCCATGGTGCTCTCTCAAACAAGGCAACAAGAGCGAAGAGATGAAGAGGTTCTTATTGAGGCAAAAAGAATAGCTGAGTTACGCATGCCAGCTAAGGCTGTTGAAGAGTCTCAGTTGGCTGTTGCCTCAAATCCTGGTGCAGAAGTTACAGAGAGGACTATCCCAGGTGAAACTGCATCTTCATCAATGGTTGTGCCTTCCACATTAACAGATAATGCAGCGACTTTAGCTTCTCTTCGCACTCTTCGTGTATATTTGAGAACATACGCACTTGAGCAAATGGTGCAAGCTGCAAGCTCATCTGCTGGACTTCGGACTATCAAACGGGTTGAGCAAACTTTGCATGATCTTGGGGTCAATTTGAAACCAAGGGTTCCAACAAAAGCTGTTTGCGCAGAGCATCTTGAACTAAGAAAAGAAATACTAATTTTACTCAATCTTCAGAAGCAGGTGCAATATAAAGAGGCTGAAGGTTCATCTTTTCGCGATGGGTCATATGGTGAATCACCAGAAACACCGAAGGATCGAACATTTATTCCAGAATCCATGAGCATTGGAGGGGAAAGGGTTGGCAAAAAGGACCACAAGCGCAAGGGACCTGGAGCTCCATCACCATCTGCTCATAAAAGACCTAGAAAAATGAAGGCTTCAGATATTTAG 1347 0.4261 MDAKDILGLSKNSFPALEKKSRPHKESQRKPDGISREVYALTGGLSSLMPAIDASHLKKRPPSDEKITWQWLPFTSSARKDNLQLYHWVRVVNGAPPTGDYSFAKYNKSVGIVKYTEEEYEKHLNDPMWTKEETDQLFDFCERFDLRFVVIADRFPSSRTVEELKDRYYSDCRSKFEILNFILDYIPSYHVVCRAILIARAPSSGDVAANPLVKEPYNVSQEIERKRALSMVLSQTRQQERRDEEVLIEAKRIAELRMPAKAVEESQLAVASNPGAEVTERTIPGETASSSMVVPSTLTDNAATLASLRTLRVYLRTYALEQMVQAASSSAGLRTIKRVEQTLHDLGVNLKPRVPTKAVCAEHLELRKEILILLNLQKQVQYKEAEGSSFRDGSYGESPETPKDRTFIPESMSIGGERVGKKDHKRKGPGAPSPSAHKRPRKMKASDI 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0410 448 SUPERFAMILY Homeodomain-like 124 172 IPR009057 -
Lal18g0410 448 MobiDBLite consensus disorder prediction 1 35 - -
Lal18g0410 448 SMART sant 125 174 IPR001005 -
Lal18g0410 448 CDD SANT_DMAP1_like 129 172 - -
Lal18g0410 448 Pfam DNA methyltransferase 1-associated protein 1 (DMAP1) 304 391 IPR008468 GO:0005634|GO:0045892
Lal18g0410 448 Gene3D - 98 180 - -
Lal18g0410 448 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 188 448 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Lal18g0410 448 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 2 174 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Lal18g0410 448 MobiDBLite consensus disorder prediction 385 448 - -
Lal18g0410 448 MobiDBLite consensus disorder prediction 17 33 - -
Lal18g0410 448 Pfam SANT/Myb-like domain of DAMP1 101 173 IPR032563 -
Lal18g0410 448 MobiDBLite consensus disorder prediction 416 430 - -
Lal18g0410 448 PANTHER BNAA04G26950D PROTEIN 188 448 - -
Lal18g0410 448 PANTHER BNAA04G26950D PROTEIN 2 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0410 Lal-Chr18 3463209 3469403 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0410 K11324 - gmx:100818926 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0410 18 3463209 3469403 Lal18g0410 18 3463209 3469403 ECH
Lal5g0222 5 1900909 1906984 Lal18g0410 18 3463209 3469403 LSH