Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0406 ATGGAAGAAACATTTGTACCCTTAGAAGGAATCAAGAACGATCTGAGAGGAAGGTTAATGTGCTACAAACAAGATTGGAAAGGTGGAATCAAAGCAGGCATAAGGATTTTGGCACCCACCACATACATATTTTTTGCTTCTGCAATACCTGTCATTTCGTTTGGTGAACAACTAGAGCGGGATACAGAGGGTGTTCTAACAGCTGTTCAAACCTTGGCATCGACTTCGATATGTGGCATTATACACTCTATCGTTGGTGGTCAACCCTTACTGATTTTAGGAGTGGCAGAACCTACTGTGATCATGTACACATTCATGTTTGATTTTGCCAAAGAGAGACCTGAGTTGGGTCGGAATAAGTTTCTCGCATGGACTGGATGGGTATGTGTTTGGACATCACTGTTGCTGTTTCTATTCGCCATCTTAGGGGCTTGTTCCATAATCAATAGGTTTACGCGTATTGCAGGAGAGTTGTTTGGTATGCTTATAGCAATGCTCTTCATGCAGCAAGCTATCAAAGGACTAGTGGATGAGTTTCGCATACCAAAGCGAGAAGATCCAGCATCAACTGAGTTTTTACCTTCTTGGCGGTTTTCTAATGGGATGTTTGCTTTAGTTCTTTCATTTGGCCTTCTCCTTACTGCATTAAAAAGTAGGAAGGCTAGGTCATGGCGCTATGGTAGTGGTTGGATTCGCAGCTTAATAGCCGACTACGGTGTGCCCCTTGTGGTCCTAGTTTGGACAGGTGTGTCCTACATGCCATCTAAAAATGTTCCACATGGTATCCCAAGGCGTCTCTTTAGCCCAAATCCATGGTCGCCTGGTGCATACGAGAATTGGACTGATATGGTCAATGTTCCTGTTGTCTACATAATTGGTGCATTTATCCCAGCAACCATGATTGCAGTGCTTTATTACTTCGATCACAGTGTGGCATCGCAGCTTGCGCAGCAGAAAGAGTTCAATTTGAGAAAGCCATCATCTTACCATTATGACTTGCTCCTTTTGGGTGTTTTGACCTTACTGTGTGGCCTTATTGGAATCCCTCCTTCAAATGGAGTCATACCGCAATCACCTATGCATACCAAGAGTCTAGCAACTCTTAAACATCAGTTACTTCGTAACAGACTAATGTCAATCGCACGAAAAGGTATGAGAAAGAATGCTAGTTTAGGACAGTTATATGGAAATATGCAAGAAGCCTACCATCAAATGCAGACTCCTCTTATTTACCAGGAACCCTCTGCTAGAGCGCAGGGACTAAAAGAATTAAAAGAAACAACCATTCAAGCAGCTACTAGTTTAGGAAACATGGATGCCCCGGTAGATGAGACGATGTTCGATGTTGAGAAAGAAATAGACGATCTGCTACCTGTCGAGGTAAAGGAACAACGTGTCAGTAATTTACTCCAATCAATCATGGTTGGAGGATGCGTTGCAGCCATGCCGTTACTCAAGAAGATCCCAACCTCAGTCCTTTGGGGCTACTTTGCCTTCATGGCTATTGAAAGTTTGCCAGGAAATCAGTTTTGGGAAAGGATCCTATTACTCTTCACTGCACCAAGCAGAAGATACAAGGTGCTTGAGGATTACCATGCTACTTTTGTGGAAACTGTCCCTTTCAAGACAATAGCAACATTCACCATTTTCCAAACACTTTATCTTCTTGTATGTTTTGGACTAACTTGGGTTCCTATTGCTGGGGTCATGTTTCCTATGATGATCATGCTCTTAGTTCCTGTTAGACAATACTTTCTCCCTAAATTTTTCAAAGGTGTACACCTTCAAGACTTGGATGCAGCAGCATATGAAGAACAAACTGCTTTACCATTCAACCTTGCAACACAATCGGAGTTTGGAGGCGGTGCTTCTCAGATTGATGAAAGTGAGATCCTAGATGGTGTTATCACTAGAAGCCGTGGCGAGTTTAGGCGCACTAGCAGTTCAAAGATCACAAGCACTACTCCAACACCAGGAAATGATCTTAAGAGCCATCATAGCCCACGTCTTTCGTTCAATTCTCGCGCTGGTGAGCTCACAACTGAACAGAGTCCTCGATCCGGCACCAGAAGTCTCTATAGTCCAAATGGTACACAAGTGAGATTATCAAGCCTGGGAAGAAGCAGGACAACAAATAACTAG 2142 0.4328 MEETFVPLEGIKNDLRGRLMCYKQDWKGGIKAGIRILAPTTYIFFASAIPVISFGEQLERDTEGVLTAVQTLASTSICGIIHSIVGGQPLLILGVAEPTVIMYTFMFDFAKERPELGRNKFLAWTGWVCVWTSLLLFLFAILGACSIINRFTRIAGELFGMLIAMLFMQQAIKGLVDEFRIPKREDPASTEFLPSWRFSNGMFALVLSFGLLLTALKSRKARSWRYGSGWIRSLIADYGVPLVVLVWTGVSYMPSKNVPHGIPRRLFSPNPWSPGAYENWTDMVNVPVVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGVLTLLCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLMSIARKGMRKNASLGQLYGNMQEAYHQMQTPLIYQEPSARAQGLKELKETTIQAATSLGNMDAPVDETMFDVEKEIDDLLPVEVKEQRVSNLLQSIMVGGCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIATFTIFQTLYLLVCFGLTWVPIAGVMFPMMIMLLVPVRQYFLPKFFKGVHLQDLDAAAYEEQTALPFNLATQSEFGGGASQIDESEILDGVITRSRGEFRRTSSSKITSTTPTPGNDLKSHHSPRLSFNSRAGELTTEQSPRSGTRSLYSPNGTQVRLSSLGRSRTTNN 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0406 713 MobiDBLite consensus disorder prediction 646 713 - -
Lal18g0406 713 PANTHER ANION EXCHANGE PROTEIN 1 698 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lal18g0406 713 PANTHER BORON TRANSPORTER 2-RELATED 1 698 - -
Lal18g0406 713 MobiDBLite consensus disorder prediction 643 713 - -
Lal18g0406 713 Pfam HCO3- transporter family 459 549 IPR011531 GO:0006820|GO:0016021
Lal18g0406 713 Pfam HCO3- transporter family 8 180 IPR011531 GO:0006820|GO:0016021
Lal18g0406 713 Pfam HCO3- transporter family 202 370 IPR011531 GO:0006820|GO:0016021
Lal18g0406 713 Gene3D Helical hairpin bin 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0406 Lal-Chr18 3441042 3444943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0406 1 686 Antiporters AT3G62270 80.636 0.0 1139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0406 K24194 - gmx:100776705 1260.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0406 18 3441042 3444943 Lal18g0406 18 3441042 3444943 ECH
Lal3g1401 3 19937030 19941195 Lal18g0406 18 3441042 3444943 LSH