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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lal18g0398
GAAGGCAAAGATTGTGACACAATGAAGAGCAAAATAATCGCTTCTGCGGTTTCCCTCATTCTTGTGGTAGGTGTTGTCATTGGTGTTGTTGCCATTGTAAGCAAGGACAATGGCAATGGTACTAGTGATGGTCATCAATTGAATTCTCACAATAAGGCTATAACAGCTTTATGTAATGATGCTGATGATAAAAAACTTTGCCATGAAGTCCTTAAGCCTGTTAGTAACTCTTCAAACCCAAAGGAATATGTTGAAACTGTGGTGAAAACCACCATGGATAGTGTCATTAAGGCCTTTAACATGAGTGATAGGTTAACAGTTGAACATGGTAAAAGTAACCCTAGCCTTAAAATGGCTCTTGATGATTGCAAGGATTTGTTGCAATCTGCCATCCATGAACTTGAGGCTTCAGGTGTTTTTGTTCGTGATGGAAACATTCAAGATGTCCTCACACATTCAGCAGAACTAAAAAATTGGTTGGGTGCTGTAATTGCCTACCAACAATCTTGTCTTGATGGCTTTGATACAGAGGGAGAGAAGAAAATCCAAACACAATTACATACAGATAGTTTGGACAGTGTTGGAAAGCTTACTGGATTAGCTCTTGATGTTGTATCTGGGATTTCAAAAGTACTTTCTTCATTTAACCTCAACTTGAATTTGAAACCTGCCTCAAGAAGGCTTCTTGAGGTTGATCATGAAGGGTACCCTACATGGTTATCAGCTTCTGATCGTAAGCTTTTGGGTGCTAAGGTTGAAGGTGGTAATAATGGATTTATACCCCATGCAATAGTTGCCAAGGATGGAAGTGGAAAATATAAGAGTATTTTGGATGCTATTAACTCATACCCAAAGGGACACCAAGGTAGATATGTTATCTATGTTAAGGGGGGTATCTATGATGAGTACATCATTGTTGACAAGAAAAAGCCAAATATTTTGTTATATGGTGATGGCCCTTCAAAGACCATCATCACAGGTCGCAAAAACTTCCATGAGGGTGTTAAGACAATGAGAACTGCCACCTTTTCCACCGTTGCTGATGGTTTCATTGCCAAGGGAGTTACATTTGAGAACACCGCGGGTGCGATCGGCCACCAAGCAGTAGCACTCCGCGTGCAAGGTGATCAATCAGCTTTCTTCGATTGCGCAATTCGTGGTTACCAAGACACCCTATACGCACATGCTCATCGTCAATTCTACCGCAATTGTGAAATCTCTGGCACCATTGACTTCATTTTCGGCTATGCATCAGCCCTAATCCAAAACTCCAAGATCATAGTGAGGAAGCCAGATCCAAACCAATCAAACATTGTAGTAGCAGATGGCACAGACCAAAAGAACATGCCTACAGGAATAGTCCTTCAAAATTGTGAGATCCTCCCAGAGAGTGGACTACAAGCTGATAGGTTAACAATTAAGACTTACTTGGCTAGGCCATGGAAGGCATACTCTAGGGCAGTGTTCATTGAAAATGTTATTGGTGACCTAATCCACCCACTAGGCTATATTCCATGGGCTCCTGAACCCAACACACAATTCTCTTACTTTGCTGAGTTTGGTAACACTGGACCTGGTGCAAATACTCTTGGAAGGGCTAAGTTTGCCAAGGGACAAATTAATAAGCAAGATGCTGAAAAATTCATAGCTGAACATTGGATTCAAGCTAGTACTTGGTTACCTCCAACTGGCATTCCTTTTGATGGTGCCTTCACCAAGCACTGA
1725
0.4151
EGKDCDTMKSKIIASAVSLILVVGVVIGVVAIVSKDNGNGTSDGHQLNSHNKAITALCNDADDKKLCHEVLKPVSNSSNPKEYVETVVKTTMDSVIKAFNMSDRLTVEHGKSNPSLKMALDDCKDLLQSAIHELEASGVFVRDGNIQDVLTHSAELKNWLGAVIAYQQSCLDGFDTEGEKKIQTQLHTDSLDSVGKLTGLALDVVSGISKVLSSFNLNLNLKPASRRLLEVDHEGYPTWLSASDRKLLGAKVEGGNNGFIPHAIVAKDGSGKYKSILDAINSYPKGHQGRYVIYVKGGIYDEYIIVDKKKPNILLYGDGPSKTIITGRKNFHEGVKTMRTATFSTVADGFIAKGVTFENTAGAIGHQAVALRVQGDQSAFFDCAIRGYQDTLYAHAHRQFYRNCEISGTIDFIFGYASALIQNSKIIVRKPDPNQSNIVVADGTDQKNMPTGIVLQNCEILPESGLQADRLTIKTYLARPWKAYSRAVFIENVIGDLIHPLGYIPWAPEPNTQFSYFAEFGNTGPGANTLGRAKFAKGQINKQDAEKFIAEHWIQASTWLPPTGIPFDGAFTKH
574
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lal18g0398
574
Gene3D
Invertase/pectin methylesterase inhibitor family protein
49
209
IPR035513
-
Lal18g0398
574
Gene3D
-
258
571
IPR012334
-
Lal18g0398
574
PANTHER
PECTINESTERASE
11
570
-
-
Lal18g0398
574
SUPERFAMILY
Plant invertase/pectin methylesterase inhibitor
51
206
IPR035513
-
Lal18g0398
574
CDD
PMEI-like_3
56
210
-
-
Lal18g0398
574
ProSitePatterns
Pectinesterase signature 2.
406
415
IPR033131
-
Lal18g0398
574
PANTHER
PECTINESTERASE
11
570
-
-
Lal18g0398
574
Pfam
Pectinesterase
263
556
IPR000070
GO:0030599|GO:0042545
Lal18g0398
574
Pfam
Plant invertase/pectin methylesterase inhibitor
53
202
IPR006501
GO:0004857
Lal18g0398
574
TIGRFAM
PME_inhib: pectinesterase inhibitor domain
41
194
IPR006501
GO:0004857
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lal18g0398
Lal-Chr18
3380160
3382263
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lal18g0398
9
567
Carbohydrate Esterase
AT3G05610
38.761
1.80e-131
397
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Lal18g0398
K01051
-
gmx:100808559
833.558
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Lal5g0212
5
1829651
1832106
Lal18g0398
18
3380160
3382263
LSH
Lal18g0398
18
3380160
3382263
Lal12g0544
12
3890751
3892787
PCT
Lal18g0398
18
3380160
3382263
Lal13g0552
13
3593171
3595285
PCT
Lal24g0446
24
3136250
3138178
Lal18g0398
18
3380160
3382263
PCT
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