Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0388 ATGGGTGATTATGACAGAATGGAAAATGATGATTTAATAGAAGAAGAGGATATGTTTGTGAACATAGTGATTATTGGGGTCTCCATGATTATGATTGCATCAATCACCATTGGTCTTTTTGCATTCCCTGTACCAACCACAAAGACCACAGGGGCTAGGAGCACCAACATTACAGAAATTTGCAGAAAAACAGATGAAGAAAAAGCATGTTTAGAAGCCATAAAACATGTTGGTGAAAAAGGCACAGGTTTTGATTATATGAAAGCTGCAATTAACACAACTCATGAAGAATTTCTGGTGTTGAACATGCCTAATCCTCATTATTTTAAAATGGGACTAACCCTTTTGCAAGAACAGTCATATAGAGATTGTTTGCAAATATTAGAGTTGGGAAAGGAAGAACTTGAATCCTTGTATAAGATGGCAAATTCTTCTGTGAACATGTCAACGATGAAACAAGATGATGTGAATGTGATCAATAGTCTAAGTGCTATAATCTCATACCAGCAAACTTGCTATGATGAATTGCTCCAAACAAATAGCTATCTACCTTTTCAACATTTATTGAAAAGGACAATTAAGCTTACAAGGATGACCTTGACAATTGTTAACTATTTCTTCTATGAAAACCCTGATATCAATCCTAAGGATGAGGCTTTAGATATCAATATGAAGATGAGTTTGGACTTAGAAGATATCAGACATGATGGATATCCAACATGGATGAAGGGGTCATCAATTAAGAGGAAAATGTTAGAGGGTGGTTTTAAGCAACCAAGTGCAGTTGTGGCTCAAGATGGAAGTGGACAATTCTCAACCATAACTGAGTCACTCAATGCATGCAAAAACAAGAGCCATGGTTCATGCATTATTCATGTGAAGAAAGGTATATATGAAGAGAGAGTGGTGGTTCCTAAGGATTTAGATCATGTTCTAATGTATGGTGATGGCCCTATGAATACCATTGTCAGTGGAATTAACAATTCCAAGATATTTACAACATCTTTTCAGGCAGCAACTTTTGTTGTAATGGGAAAAGGGTTCATTTGCAAAGACATGGCTTTCACTGCCCCATCTGAAATCATAACAGCACCAGCACTCCTTGTTCTTTCTGATCATGCAGCATTCTTCAACTGCAAAATAGAAGGTAATGAAGGAACCTTGTTTGCAGTGGCCCAACGCCAATTCTACCATGATTGTGAGATTCATGGTAACACTGATATTATAAAAGGAGACTCAGCAACTATAATCCAGAACTCACAAATCATTGTGAAGCCTCAAAGCTCTCATGACTCAAATCAAAAGGAAAAAGTTGTGAGTGCTCAATATAAGTTAGATAAGTATGAAAATACTGGTTTTGTGATCCAAAACTGCACTATAATAGCAGAAGGAGGAAACAACAATAGTCTTTCTGGTACAACTTACTTGGGCACCCCTTATAAAATATACTCAACAACCCTAGTTATGGAATCATATATAGGAGATGTGATCAATGAAGAAGGGTGGTGTGAATGGAGAGACAACTATGGCACTGAAACAGCAACATTCCTTGAGTATAATAATACAGGACCTGGTGCAAAAACTGGTTTAAGGGTTAGTTGGAATAGCTACCAAAACATTTCTGAGAAAGAAAAGGTGCTGAATTATACAGCTGCTAAATTTATCCAAGCAGATCAATGGTTTGAGTGA 1689 0.3683 MGDYDRMENDDLIEEEDMFVNIVIIGVSMIMIASITIGLFAFPVPTTKTTGARSTNITEICRKTDEEKACLEAIKHVGEKGTGFDYMKAAINTTHEEFLVLNMPNPHYFKMGLTLLQEQSYRDCLQILELGKEELESLYKMANSSVNMSTMKQDDVNVINSLSAIISYQQTCYDELLQTNSYLPFQHLLKRTIKLTRMTLTIVNYFFYENPDINPKDEALDINMKMSLDLEDIRHDGYPTWMKGSSIKRKMLEGGFKQPSAVVAQDGSGQFSTITESLNACKNKSHGSCIIHVKKGIYEERVVVPKDLDHVLMYGDGPMNTIVSGINNSKIFTTSFQAATFVVMGKGFICKDMAFTAPSEIITAPALLVLSDHAAFFNCKIEGNEGTLFAVAQRQFYHDCEIHGNTDIIKGDSATIIQNSQIIVKPQSSHDSNQKEKVVSAQYKLDKYENTGFVIQNCTIIAEGGNNNSLSGTTYLGTPYKIYSTTLVMESYIGDVINEEGWCEWRDNYGTETATFLEYNNTGPGAKTGLRVSWNSYQNISEKEKVLNYTAAKFIQADQWFE 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0388 562 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 206 IPR035513 -
Lal18g0388 562 SUPERFAMILY Pectin lyase-like 260 561 IPR011050 -
Lal18g0388 562 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 13 561 - -
Lal18g0388 562 Pfam Plant invertase/pectin methylesterase inhibitor 57 200 IPR006501 GO:0004857
Lal18g0388 562 Gene3D - 258 562 IPR012334 -
Lal18g0388 562 PANTHER PECTINESTERASE 13 561 - -
Lal18g0388 562 Pfam Pectinesterase 261 558 IPR000070 GO:0030599|GO:0042545
Lal18g0388 562 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 206 IPR035513 -
Lal18g0388 562 CDD PMEI-like_3 60 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0388 Lal-Chr18 3308235 3319139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0388 43 558 Carbohydrate Esterase AT2G26450 34.369 1.11e-77 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0388 K01051 - gmx:102665007 567.385