Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0378 ATGGTTTGCCAAGAAGAACAATTGGTTAAAAAAGTGTGTGAACTCTATGAACAAATCTCAAGCCTAGAGAGTCTTAAACCTTCCAAAAATGTGGACATGTTGTTCACCCAACTTGTCCTCACATGCATGCCACATAGTCCAATTGATGTTACCAAACTCAACAAAAATGTGCAAGAAATTAGATCCAAACTTATAAGACTATGTGGTATAGCTGAAGGACACTTAGAGAATCACTACTCAACAATTTTAGGCTCATATGAAAACCCTCTTCATCATCTCCATATTTTCCCTTACTATAACAATTACCTCAAACTTGGTCTCCTTGAATTCAACATCCTTAGCCAACACATCACTAATGTCCCTAACAAAATTGCTTTTGTTGGTTCAGGCCCTCTTCCACTTACCTCTATTGTCTTAGCATCAAATCACTTACTCTCAACCATTTTTCACAACTATGATATCGACTCTACGGCCAATTTAAATGCTCAAAACTTGGTTATCAATGACCCCGAGTTATCGAACCGGATGGTTTTCCATACGAATGATATATTGGATGTGTCAAATGAATTGCAAGAGTTTGAAGTTGTTTACTTGGCTGCCCTTGTTGGAATGGACAAAGAATCAAAGAATCGTGTGATTGATCACCTGGCTAAGTTCATGGCCCCAGGATCATTTTTGATGCTAAGGAGTGCTCATGGTGCTCGTGCTTTTCTTTACCCAGTGGTCGAACCTTGTGATCTTAAAGGATTTGAGGTTCTCTCTATGTTTCATCCAACAGATGAGGTTATTAATTCTGTTGTTATAGCACGTAAGTACCCTATGCCTATACCTATGCCTAATATATCACTCGACCAAGGTCATGGTTCTGTGATATTACCAATTAAATGTGCCGAGATGATCCAAGTCTTCAACCCCCTAATCAACCATGAGAATATCATTGAGGAATTGATTGTTGAGGAGAAACATTCTTGA 972 0.3858 MVCQEEQLVKKVCELYEQISSLESLKPSKNVDMLFTQLVLTCMPHSPIDVTKLNKNVQEIRSKLIRLCGIAEGHLENHYSTILGSYENPLHHLHIFPYYNNYLKLGLLEFNILSQHITNVPNKIAFVGSGPLPLTSIVLASNHLLSTIFHNYDIDSTANLNAQNLVINDPELSNRMVFHTNDILDVSNELQEFEVVYLAALVGMDKESKNRVIDHLAKFMAPGSFLMLRSAHGARAFLYPVVEPCDLKGFEVLSMFHPTDEVINSVVIARKYPMPIPMPNISLDQGHGSVILPIKCAEMIQVFNPLINHENIIEELIVEEKHS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0378 323 PANTHER NICOTIANAMINE SYNTHASE 3 1 322 IPR004298 GO:0030410|GO:0030418
Lal18g0378 323 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Lal18g0378 323 Gene3D Vaccinia Virus protein VP39 4 273 IPR029063 -
Lal18g0378 323 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Lal18g0378 323 PANTHER SYNTHASE, PUTATIVE-RELATED 1 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0378 Lal-Chr18 3233081 3234052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0378 1 322 Nicotianamine Synthase Gene Family AT1G09240 60.736 5.05e-135 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0378 K05953 - gmx:100794250 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0378 18 3233081 3234052 Lal18g0378 18 3233081 3234052 ECH
Lal3g1431 3 20252894 20253859 Lal18g0378 18 3233081 3234052 LSH