Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0374 ATGGAGATTGATAAAAAACGTTCCAAGGGAAGCTTCTTCAGCTTGTTTGATTGGAATTCCAAAACTAGAAAGAAATTGCTTTGGAATAATCCTAATTTACCTGAGGGTTCAAAACATGGAAAGGAAAATGTGGACAACATGCCAAAGAGGAAGATCAATAGGAATAAGGTGGATGAGAATGGAGCAAGTCCAAGTAACATTGCAAGTTCTAATTATAACTGTTCCCTCTCAATTAGTAGTGATGAAGGATATGGGAGTAAAGCCCCTGGGTTAGTAGCGAGACTCATGGGTTTGGATTTGCTGCCAACTTCGGCAGTCACTGAGCTTTCCTCCACTTCATTGTATTGCTCTAACTCTCATGGAGCTTCTCATTGTCACGAGGATGGTCTTTATTCAAAGGATAACTTTCATCCAGTGGACAATATAAATGTGCCACTTAAAGTGGAGAAGCCTTCTTGGGATGCAATGGAATCAAGTGCACACAAAGTGGGAAACTGGCCAATGAAGAGGTTCCAAACTGAAATGTTGCCTCCAAAGTCAGCTAAACCCATTCCAGTTACTCATAATAAACTGTTGTCTCCTATTAAGAGTCCTGGTTTTATGTCCCCAAAGAATGCAGCTCACATAATGGAGGCAGCTTCCAAGATAATTGAGGCAAGCCCTCGGCTATATGTGAGAAATAAAATGTCACCGGTTGGACCTTCATATGTTCCCTTGAGAATTCTTGATTTGAAAGAGAGATTGGAAGGTTCACAATACGTATCCATGCCTCAAAAGCCTGTGGGTCCGAACACGACCAAGCTCGCAAATGGCAAGCCTAGTAATAGGAGTAGTGATTTATATAAATGCTGTCCAACTTTGAAGGGTTCAAGAGATTCAGAAAAAAGTAGTTATCACAACTTAGCAAGTAAGGGAAAATCAGTTTCACAAGCAATACAAACCCAAACCAATGTTCAGAGCAGAGATGAATTGACTTCAAAAGGTAATAAGAGGTACATAAAGCAGAAAGAACAGACTGAGATAAAGTCAAACCATTTGTCCAGGAACCGGAATCTCAGTACACAACGAGCCATGCAGCAGAGAACTGGCACAAGCCACAATTCGAATGTGCTTAGGCAGAATAATCAGAAGCAGAATAGTTTAACCATCAAAGGTAAATCATCTTCAAAAATAGACTCCAATAAGCCAATAACACAAACTTCGTCTTCAGAAAGTTATACTGGAATAAGAAAGACAACGAACAAGGGTGCTACAAATACCACTATTCAGTCTAAAAGGTCAAGCACTAGAGCAACTGGTAGCCGAAAGGAGTTCCCACCATCCGATAGTATTTCCCAGAAGAGAAGGTATATAAGCAAGGATGTTCATGAGGCAAGAGGTCCTGATAAAGAGGTAAATAATTTTGAAAGTAAATCCATAAAATGCAATATTACAAGTGATGGAAGTATTGATCAGGATGGTGCATTTAACATGAATGAGAGCAAGGATGTTATTTCATTCACGTTTACATCTCCCTTGAAGAGAAGCATGCCCAAGTCCTTGTCTGCCGAGCAAGTCGTGGGAAGTAGAACTATAATTGCTATAGATTCTCATGAGCATAGTGATAACCTTTATCCCAAAAAGTTATCATTATCTCCTCCACGGTTACATATGATAAATGCTGATACTTTAAGCGACCTATTGGAGAAAAAGCTTCAAGAATTGACATCTAGAATTAATTTACCTCAATGTATCTTGGCCACGGAGGAGCCTTCTGCTGATTCAAGATCTAGTTTGCAAAACCAGGTTCCAAGTTTTGTAAGCCCCACATCTGGAGAACAAGACAGAAGCTTAAATCCTTACCATGCCTATTGTTCTTCGAATGGTGGTCCAGTGTTTCACATGAATCAACAATTTCAGAAAGTAATGGAAGATCCTAGCTATAGCAACAACAGTGAAAATGGAAACGATCGAGGTTGTCAGCATCCCAGATCTGTCACTATTTTTGAAAGTCCTTCTGTGAGTGAAAGTTACCTGGATAGCGAAGACAGTGCATATGGTAGCACAATTTATTCTTCCATGCAAGATGATGAAGTGTCTAATATTTCTGTGAAAACTGAACCTGTATCATTTGAAAACGAGGTGAAATGTTCAGGGCAAAGCTATTCCTCGTTGGCGGTGGAAAATATGGCCATAAAACGATTAACTGAAATATCAAATTCGGTAGATTTTAAAAGATCAAGGAACACGAGACTTGAATATGTACAGGATATACTCGCCAATGCAGAGTTTATGGCAGAAGAATTTGTCACTGGCCAAACTAATACAGTCATGATGCCAAATGTCTTTCATCAGTTGGAGAATCAGAGCAATCGAACAGAAAACTGTAGAGAAGAGTGGTCTAAGCTTGAAAGGAAGCTTGTATTTGACTTTGTTAGTGAGTGCCTAGAGTTGAAATGTAGGCAAGCTTTTTCTCGAAGCTGCAAAGAATGGCCTGGATTGGAAACATCAATTCAAAGGAAGAGCATTTTGGCAGAGGAATTGTATAAGCAGATGTTGGGTTTCAGAAACATTGAAGAAGAGGTAATGGTGGATGAGCTTGTCGACAATGACATGAGCAATGGTTACGGGCGATGGCTTGGCTTCAATGTTGAAGCCTTTGAAGAGGGTATAGAGGTTGAGCAGGACATACTAGATAATTTAATGAATGAATTGATTTCTGATTTATTACATGCTTAA 2718 0.3959 MEIDKKRSKGSFFSLFDWNSKTRKKLLWNNPNLPEGSKHGKENVDNMPKRKINRNKVDENGASPSNIASSNYNCSLSISSDEGYGSKAPGLVARLMGLDLLPTSAVTELSSTSLYCSNSHGASHCHEDGLYSKDNFHPVDNINVPLKVEKPSWDAMESSAHKVGNWPMKRFQTEMLPPKSAKPIPVTHNKLLSPIKSPGFMSPKNAAHIMEAASKIIEASPRLYVRNKMSPVGPSYVPLRILDLKERLEGSQYVSMPQKPVGPNTTKLANGKPSNRSSDLYKCCPTLKGSRDSEKSSYHNLASKGKSVSQAIQTQTNVQSRDELTSKGNKRYIKQKEQTEIKSNHLSRNRNLSTQRAMQQRTGTSHNSNVLRQNNQKQNSLTIKGKSSSKIDSNKPITQTSSSESYTGIRKTTNKGATNTTIQSKRSSTRATGSRKEFPPSDSISQKRRYISKDVHEARGPDKEVNNFESKSIKCNITSDGSIDQDGAFNMNESKDVISFTFTSPLKRSMPKSLSAEQVVGSRTIIAIDSHEHSDNLYPKKLSLSPPRLHMINADTLSDLLEKKLQELTSRINLPQCILATEEPSADSRSSLQNQVPSFVSPTSGEQDRSLNPYHAYCSSNGGPVFHMNQQFQKVMEDPSYSNNSENGNDRGCQHPRSVTIFESPSVSESYLDSEDSAYGSTIYSSMQDDEVSNISVKTEPVSFENEVKCSGQSYSSLAVENMAIKRLTEISNSVDFKRSRNTRLEYVQDILANAEFMAEEFVTGQTNTVMMPNVFHQLENQSNRTENCREEWSKLERKLVFDFVSECLELKCRQAFSRSCKEWPGLETSIQRKSILAEELYKQMLGFRNIEEEVMVDELVDNDMSNGYGRWLGFNVEAFEEGIEVEQDILDNLMNELISDLLHA 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0374 905 MobiDBLite consensus disorder prediction 583 614 - -
Lal18g0374 905 MobiDBLite consensus disorder prediction 324 344 - -
Lal18g0374 905 MobiDBLite consensus disorder prediction 300 323 - -
Lal18g0374 905 MobiDBLite consensus disorder prediction 345 440 - -
Lal18g0374 905 Pfam Domain of unknown function (DUF4378) 745 897 IPR025486 -
Lal18g0374 905 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 903 - -
Lal18g0374 905 Pfam DUF761-associated sequence motif 79 105 IPR032795 -
Lal18g0374 905 MobiDBLite consensus disorder prediction 28 64 - -
Lal18g0374 905 MobiDBLite consensus disorder prediction 255 463 - -
Lal18g0374 905 PANTHER DUF4378 DOMAIN PROTEIN 1 903 - -
Lal18g0374 905 Coils Coil 779 799 - -
Lal18g0374 905 MobiDBLite consensus disorder prediction 638 657 - -
Lal18g0374 905 MobiDBLite consensus disorder prediction 257 281 - -
Lal18g0374 905 MobiDBLite consensus disorder prediction 38 57 - -
Lal18g0374 905 MobiDBLite consensus disorder prediction 441 463 - -
Lal18g0374 905 Coils Coil 877 897 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0374 Lal-Chr18 3202287 3207613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0374 3 903 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 30.316 2.70e-98 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0374 - - lang:109330253 1260.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0171 5 1483162 1487751 Lal18g0374 18 3202287 3207613 ECH
Lal18g0374 18 3202287 3207613 Lal18g0374 18 3202287 3207613 ECH
Lal3g1433 3 20266022 20270789 Lal18g0374 18 3202287 3207613 LSH
Lal5g0171 5 1483162 1487751 Lal18g0374 18 3202287 3207613 LSH
Lal18g0374 18 3202287 3207613 Lal13g0622 13 4044514 4049407 PCT
Lal13g0622 13 4044514 4049407 Lal18g0374 18 3202287 3207613 PCT