Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0373 ATGGTATCAAATAAGAAATTTCTCAAGGAGCATGAGAGTAGTGACAAAATTCCAATTCAAAAGTCAAAAGAGAAACATGTTGATGATACTAAACAATCAATGAGTGATCTTAGAAATGTAATAAACGTACTATGCATGAATGAGCACAACTCATACGTGGAAACTTTTCTGCGAAGAGTGGTAAGAGAGGTGGTTGAACATAAAATCCAAGATTACCAATTCCCAAGAACAAGGATTCATAATCAATCTGGCATATCTGGAGCTAAACTCTTCCACTTGTGTTTTATAAATAAGTTGCCTAATAAAATTTTCACACTTTCTAATATCATAGCAGATGATAAATCACCCCTTCAAATTGCATTATATAATGTTAGTACTAAATCTATAGTCAATGATGGTCCCTTCTCATCAATAAAGATAGAGATATGTGCCCTTAATGGTGACTTTGGATCCAATAATGGAAGTGAGGATTGGACTGAAGGTGAATTCAATGCCAATATCTTGAAAGAAAGAGAAGGTAAAAGACCATTAGTGAAAGGAGATAGGTTTATTACTCTAAAAAATGGTGTTGGTTGTATCACTAAAATGGCCTTTACTGATAATTCAAGATGGTTAAGGAACAGAAAATTCAGGTTAGGAGCCAAAGTTGTGCAATCAAATTCCATTGGAACAAAGATTAAGGAAGGTAGAAGTGAAGCATTTGTGGTCAAAGACTACAGAGGAGAGTCATACAAGAAGCACTACCCTCCAGCTTTGAACGACGATGTATGGCGCTTGGTGAAAATCGGCAAAAATGGAAAAATCCACATGCGGCTCGCATTCCATGGAATTCACACTGTTAAGGATCTCTTGCAGTTATACACAATCAACCAATCTTTATTACATGAGAAGTTTGGTAAAATTTCAAAGAAGTTAAAGTTAGCAATTATTGAACATGCCAAGACTTGTGTGATAGATGATTACAAACTATACAGTTATCACACAGAAGAACAACCAATAGGCCTAATATTCAATTCCATCTACAACCTTATGGAAGTAACATTTGATGGTCACAATTATCATTCACCAAATACTCTCAGCCCAATTGAGAAGAATTTAGTGGAATTAGTGAAGCAAATTGCTTACAACAATGTGAATAACTTGAAATCAATTGATGAAATTTCATTAAACTGCGTACGACCCGCGACATGTCTAAGAACATGTCAATCATATGCTCAAGATCAAGTTCTGCAGCATACTAATATCTCTACAGCAGATGATATATATCAAGAAGAAACAATGTCAGATAATAGTGAACCTTTCATCACTACTTCATATATTGATGAAGGAGTACATGATTATCAAACTTATGTTGATCCTCTGCCAGACCAAAGAGACATGTTTCAAAACAACTATGCAGAAGATGAATTTTTCTGTGGAATGTACATTGAGGGAGATAATTGGAACCTTAATGGATCACATTTTCTAGTTTCTCAAGGTGGCTATTCAACATAG 1494 0.3487 MVSNKKFLKEHESSDKIPIQKSKEKHVDDTKQSMSDLRNVINVLCMNEHNSYVETFLRRVVREVVEHKIQDYQFPRTRIHNQSGISGAKLFHLCFINKLPNKIFTLSNIIADDKSPLQIALYNVSTKSIVNDGPFSSIKIEICALNGDFGSNNGSEDWTEGEFNANILKEREGKRPLVKGDRFITLKNGVGCITKMAFTDNSRWLRNRKFRLGAKVVQSNSIGTKIKEGRSEAFVVKDYRGESYKKHYPPALNDDVWRLVKIGKNGKIHMRLAFHGIHTVKDLLQLYTINQSLLHEKFGKISKKLKLAIIEHAKTCVIDDYKLYSYHTEEQPIGLIFNSIYNLMEVTFDGHNYHSPNTLSPIEKNLVELVKQIAYNNVNNLKSIDEISLNCVRPATCLRTCQSYAQDQVLQHTNISTADDIYQEETMSDNSEPFITTSYIDEGVHDYQTYVDPLPDQRDMFQNNYAEDEFFCGMYIEGDNWNLNGSHFLVSQGGYST 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0373 497 Pfam Calmodulin binding protein C-terminal domain 322 383 IPR046829 -
Lal18g0373 497 PANTHER CALMODULIN-BINDING PROTEIN 1 484 - -
Lal18g0373 497 MobiDBLite consensus disorder prediction 1 31 - -
Lal18g0373 497 Pfam Calmodulin binding protein central domain 251 316 IPR046830 -
Lal18g0373 497 PANTHER OS02G0177800 PROTEIN 1 484 IPR012416 GO:0005516
Lal18g0373 497 Pfam Calmodulin binding protein-like N-terminal domain 92 238 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0373 Lal-Chr18 3195411 3198498 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0373 47 401 Calmodulin-binding Proteins AT5G26920 41.779 6.04e-87 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0373 - - gmx:100816427 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0373 18 3195411 3198498 Lal18g0373 18 3195411 3198498 ECH