Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0372 ATGGAATCAAAAAGGTCATTTCAGCAGAAGAGTGATGAAGGGAGTTTTCAGGTTTTAGCTCAAATCACAAAGCGTAAACGTACTGAAAATTCAAACCTAGAAGAACTTCGCAGTACCATGCAAAATGTGAGGTCTCTACTTCAAATGAAACCTGAAATCGAGCAAAAACTGACACATTTAGTTCGAAGAATTGTACAAGAGGAGTTGGAAAGAGGAATACTTCTAAGACCAATCATTAACAAGACTGAAGAATCCTTTAAGTTGGTTTTTAAGAATGAAGTGCCTACTATATTTTTTACACACTCCAAGATCAAAGCTAAAGATGAGAAGCCTATTGAAATTGCTCTATATGACACTATATCTAAGTCTATTGTCACTGAGGGTCCATTGTCTTCTATCAAAATAGAGATTTGTGTTCTTAATGGTGAGTTTGGTTCAAATGGTAGTGAGGATTGGAGTACAAATGAATTCAATGCCAAAATCTTAACTCAAAGGAATGATAAAGCACATTTACTTAAAGGAGATAGGGTTATTACACTCAAAAATGGAGTTGGAATTATCAATAACATTTTGTTCACTGATAACTCAAGCTGGACAAGAAGTAGATGTTTCAGGTTAGGAGCTAAAGTTTCCGAAACAACTCTCATTCAAGCAAACATCAAAGAAGGTCGAAGTAAACCTTTTACGGTAAAACATGACCGAAGCGAGGCGCGCAAGAAAAACCAATGTCCTTCCTTGAATGATGAGGTATGGTGTCTGAAGATGATAAAAAGAAATGGGAAAATTCACCAGCAGCTATGCTCTATTGAAATAAAAACTGTTAAGGATCTGTTGCAGTTGTACACAACCAACCAAGTTTCATTACAAAAGATAATTGGCAAGAAGTCATGGGGTTCAATTATTAAACAAGCTAAAGCTTGTGATATGGACAATGATAAACGCTACATCTATCACTTTTCTGCACCAGAACAATCAATATCCCTTCTCTTTAACTGCATCTATGAGGTTCTGGAAGTGTCTTTTAATGGCCAAAATTACTGTTCACTACAATCTCTGAATTTGAAAGACCAGCTTTTGGTGGAAAGAGTGAAGCAGCAAGCTTACACAAATGTGAAGGATAATCTGATTCCACTTGACCCAACAACTCATGCCTTATTTGAAAATTTACCTGTGCAACATATTGCTGTGGATCAACTTCTAGACCAAGGCCAACCAGAAACGTTGCCAAATTTGTGTGAGCAAGCCACCCCAACATCAAATATTGGTGAAGCTGATGCATACAATTATGAGCACCATGGTACTGAGCAACTACCAGAATTTGGAGAAATGTCATTTAACTGTGAAGATTACAAGTTGGTTTTCTCCTCTTAA 1371 0.3676 MESKRSFQQKSDEGSFQVLAQITKRKRTENSNLEELRSTMQNVRSLLQMKPEIEQKLTHLVRRIVQEELERGILLRPIINKTEESFKLVFKNEVPTIFFTHSKIKAKDEKPIEIALYDTISKSIVTEGPLSSIKIEICVLNGEFGSNGSEDWSTNEFNAKILTQRNDKAHLLKGDRVITLKNGVGIINNILFTDNSSWTRSRCFRLGAKVSETTLIQANIKEGRSKPFTVKHDRSEARKKNQCPSLNDEVWCLKMIKRNGKIHQQLCSIEIKTVKDLLQLYTTNQVSLQKIIGKKSWGSIIKQAKACDMDNDKRYIYHFSAPEQSISLLFNCIYEVLEVSFNGQNYCSLQSLNLKDQLLVERVKQQAYTNVKDNLIPLDPTTHALFENLPVQHIAVDQLLDQGQPETLPNLCEQATPTSNIGEADAYNYEHHGTEQLPEFGEMSFNCEDYKLVFSS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0372 456 PANTHER CALMODULIN-BINDING PROTEIN 1 384 - -
Lal18g0372 456 Coils Coil 19 39 - -
Lal18g0372 456 Pfam Calmodulin binding protein C-terminal domain 313 372 IPR046829 -
Lal18g0372 456 Pfam Calmodulin binding protein central domain 245 307 IPR046830 -
Lal18g0372 456 Pfam Calmodulin binding protein-like N-terminal domain 86 232 IPR046831 -
Lal18g0372 456 PANTHER OS02G0177800 PROTEIN 1 384 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0372 Lal-Chr18 3180260 3185372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0372 56 371 Calmodulin-binding Proteins AT5G26920 39.403 3.02e-70 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0372 - - lang:109332264 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0169 5 1470640 1475033 Lal18g0372 18 3180260 3185372 LSH