Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0370 ATGATGAGTGGTAAAGGTGAATTATTATCATCATCATCATCATCAAGAATGAAGTCACAGGCACAAGTAGCGGCGATTCCGTTGGGAACATTGATTGGGCGTGAACTTAGAAGTGAAAAAATTGAAAAGCCTTTTGTTAAGTTTGGACAATCTGGTTTGGCAAAGAAAGGAGAAGATTATTTCCTTATCAAAACAGATTCTTATAGGGTTTCTGGAGATTCATCAACACTCTTTTCCGTCTTCGCGATCTTTGATGGGCATAACGGTATATCAGCTGCTATTTTCACGAAGGAAAACTTATTAAATAATGTTTTGAGTGCAATACCGCAAGATATCAGCAGGGATGCATGGCTTCAGGCCCTTCCTCGTGCTTTAGTTGCTGGCTTTGTGAAAACTGACATAGAATTTCAACAAAAAGGGGAAACATCTGGAACTACAGCTACATTGGTTGTGATTGATGGGTGGACTGTCACTGTTGCATCTGTAGGTGATTCCCGTTGCATATTAGATACTCAGGGAGGTGTAGTTTCTCTCCTGACAGTTGATCACAGACTAGAAGAAAATGCAGAAGAGAGGGCGCGTGTTACTGCCAGTGGTGGTGAAGTAGGAAGACTCAATGTATATGGAGGCAACGCGGTAGGGCCTCTTCGCTGCTGGCCAGGTGGATTGTGCTTATCTCGATCAATAGGCGATACTGATGTGGGAGAATTTATTGTGCCAATACCACATGTTAAGCAAGTCAAGCTTTCAAATTATGGTGGAAGACTTATTATAGCTTCTGATGGTATTTGGGATGCTTTATCTAATGATTCGGCTGCCCAGTCATGTAGAGGTATACCGGCAGAGCTTGCTGCTAAGCTAGTGGTTAAGGAAGCTCTAAGGTCAAGAGGCCTGAAGGATGATACGACCTGCCTTGTTGTAGATATTATTCCTTCAGACCTTCCTGTATTACCACCTATTCCAAGAAAGAAACCTAGTATGCTAACCTCGCTTCTCTTTGGAAAGAAATCTGGGAACACTACAAACAAGAAGAAACCTAACATGCTAACTTCGCTTCTCTTTGGAAAGAAATCTGGGAACACTACAAACAAAGCTGCTAATAAGCTTTCTTCTGTTGGTGTTGTGGAGGAGTTATTTGAAGAGGGCTCTGCAATGCTTGCTGAAAGGTTGGGGAAGGATTTTCCATTTAATAAGAATTCTGGGATTTTTCGCTGTGCGGTTTGCCAAATGGATCAACCCCCTGGCGATGATTTATCAGTGAAGTCTGGGCCTTTTTTCTCTCCATCATCTAAGCAAAGAGAAGGCCCTTTCTTCTGCACAAACTGTCGTAAGAAGAAAGATGCCATGGAAGGTAAAAGGCCTAGCAGACCCACAGTTATAGCATAG 1386 0.425 MMSGKGELLSSSSSSRMKSQAQVAAIPLGTLIGRELRSEKIEKPFVKFGQSGLAKKGEDYFLIKTDSYRVSGDSSTLFSVFAIFDGHNGISAAIFTKENLLNNVLSAIPQDISRDAWLQALPRALVAGFVKTDIEFQQKGETSGTTATLVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENAEERARVTASGGEVGRLNVYGGNAVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNYGGRLIIASDGIWDALSNDSAAQSCRGIPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDLPVLPPIPRKKPSMLTSLLFGKKSGNTTNKKKPNMLTSLLFGKKSGNTTNKAANKLSSVGVVEELFEEGSAMLAERLGKDFPFNKNSGIFRCAVCQMDQPPGDDLSVKSGPFFSPSSKQREGPFFCTNCRKKKDAMEGKRPSRPTVIA 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0370 461 SMART PP2C_SIG_2 62 309 IPR001932 -
Lal18g0370 461 CDD PP2Cc 55 309 IPR001932 -
Lal18g0370 461 Pfam Protein phosphatase 2C 74 294 IPR001932 -
Lal18g0370 461 Gene3D - 47 313 IPR036457 -
Lal18g0370 461 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 340 460 - -
Lal18g0370 461 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 17 343 - -
Lal18g0370 461 ProSiteProfiles PPM-type phosphatase domain profile. 44 309 IPR001932 -
Lal18g0370 461 PANTHER ALPHABET, ISOFORM E-RELATED 17 343 - -
Lal18g0370 461 PANTHER ALPHABET, ISOFORM E-RELATED 340 460 - -
Lal18g0370 461 SUPERFAMILY PP2C-like 51 309 IPR036457 -
Lal18g0370 461 SMART PP2C_4 35 307 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0370 Lal-Chr18 3160917 3164253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0370 19 459 PP2C-type Phosphatase Gene Family AT1G09160 71.882 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0370 - - lang:109332291 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0370 18 3160917 3164253 Lal18g0370 18 3160917 3164253 ECH
Lal18g0370 18 3160917 3164253 Lal12g0583 12 4166148 4169629 PCT
Lal18g0370 18 3160917 3164253 Lal13g0629 13 4086189 4089792 PCT
Lal12g0583 12 4166148 4169629 Lal18g0370 18 3160917 3164253 PCT
Lal13g0629 13 4086189 4089792 Lal18g0370 18 3160917 3164253 PCT