Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0364 ATGGGTATCGATCTTAAAGCTGGTGGTAAGAGCAAAAAGACCAAAAGAACAGCACCCAAGTCCAATGATATTTACCTCAAGCTCTTGGTTAAGCTTTACCGCTTTCTTGTACGAAGGACTGGGAGCAAGTTCAATGCTGTGATATTGAAGCGCTTGTTCATGAGCAAGGTTAACAAGCCTCCCCTATCATTGTCAAGGTTGATAAAGTATACCAAGGGCAAGGAAGGTAAGATTGCTGTGGTAGTGGGAACTATAACTGATGATATTAGAACATATGAAGTTCCACCACTAAAAGTTTCTGCACTGAGGTTTACAGAGACAGCACGTGCAAGAATTGAAAAGGCAGGTGGTGAATGTTTGACTTTTGATCAACTTGCACTCAGGGCTCCTCTGGGACAGAACACAGTCCTTTTAAGAGGGCCAAAGAATGCCAGAGAAGCTGTTAAGCACTTTGGTCCTGCACCTGGTGTGCCACACAGCCATACCAAGCCTTATGTGCGAGCCAAGGGAAGGAAGTTTGAGAAGGCCAGAGGAAAGAGGAACAGCAGAGGATTTAGAGTCTGA 564 0.4486 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKPPLSLSRLIKYTKGKEGKIAVVVGTITDDIRTYEVPPLKVSALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0364 187 Gene3D - 1 187 - -
Lal18g0364 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Lal18g0364 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 186 IPR000039 GO:0003735|GO:0005840|GO:0006412
Lal18g0364 187 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 1 186 - -
Lal18g0364 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0364 Lal-Chr18 3091177 3093474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0364 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 78.495 5.81e-104 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0364 K02883 - gmx:100791657 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0364 18 3091177 3093474 Lal18g0364 18 3091177 3093474 ECH
Lal3g1451 3 20428844 20431713 Lal18g0364 18 3091177 3093474 LSH