Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0363 ATGATGATGACAATGGAGGGGATGATGGATAAGAGTGTATTAGATGATGTGATAAGAAGATTATTGGAAGGGAAAGGAGGAAAACAAGTTCAGTTATCTGAGTCTGAGATTCGTCAACTTTGTGTTAATGCCAGACAAATCTTCCTCTCTCACCCTATTCTCCTTCAACTTACTGCTCCTATTCGCCTTTGTGGTGATATACATGGTCAGTACCAAGATTTACTAAGGCTATTTGAATATGGAGGGTATCCTCCTGCTGCAAACTACTTGTTCCTGGGAGATTATGTAGACAGAGGGAAGCAAAGTTTGGAGACTATATGTTTGCTTTTGGCCTACAAAATAAGGTATCCGGATAAAATTCATCTATTGAGAGGAAACCATGAAGATGCAAAGATAAACAGGATATATGGTTTTTATGATGAATGTAAAAGGAGGTTCAATGTTAGGCTATGGAAGATATTTACAGACTGCTTTAACTGTTTGCCAGTGGCTGCACTCATTGATGGCAAAATACTTTGTATGCATGGAGGTCTCTCTCCAGAATTGCAAAATTTGAATCAGATAAAGGAGATTCAAAGGCCTACTGAAATTCCAGATAATGGTCTCCTATGTGATCTGCTTTGGTCTGATCCTGATTCTACCATTGACGGCTGGGCCGAGAGTGACCGAGGCGTTTCATGTACTTTTGGATCTGATGCAGTCACAGAGTTTTTGGATAAAAATGACCTTGATCTCATTTGCAGAGGTCATCAGGTTGTAGAGGATGGATATGAGTTTTTCGCTAAACGAAGATTAGTCACAATATTTTCTGCTCCAAATTATGGTGGGGAGTTTGATAATGCTGGTGCATTATTGAGTGTTGATGAATCTCTTGTGTGTTCCTTTGAGATATTAAAACCTATTGATAGAGGATCTTCATCAAAGATGAATCTTAAGAAGCCCCCTAAACTTGGAAAGGTTTAG 963 0.3904 MMMTMEGMMDKSVLDDVIRRLLEGKGGKQVQLSESEIRQLCVNARQIFLSHPILLQLTAPIRLCGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDGKILCMHGGLSPELQNLNQIKEIQRPTEIPDNGLLCDLLWSDPDSTIDGWAESDRGVSCTFGSDAVTEFLDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEILKPIDRGSSSKMNLKKPPKLGKV 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0363 320 Gene3D - 6 310 IPR029052 -
Lal18g0363 320 CDD MPP_PP1_PPKL 13 300 - -
Lal18g0363 320 PRINTS Serine/threonine phosphatase family signature 60 87 IPR006186 GO:0016787
Lal18g0363 320 PRINTS Serine/threonine phosphatase family signature 89 116 IPR006186 GO:0016787
Lal18g0363 320 PRINTS Serine/threonine phosphatase family signature 122 146 IPR006186 GO:0016787
Lal18g0363 320 PRINTS Serine/threonine phosphatase family signature 156 182 IPR006186 GO:0016787
Lal18g0363 320 PRINTS Serine/threonine phosphatase family signature 185 212 IPR006186 GO:0016787
Lal18g0363 320 PRINTS Serine/threonine phosphatase family signature 242 262 IPR006186 GO:0016787
Lal18g0363 320 PRINTS Serine/threonine phosphatase family signature 264 280 IPR006186 GO:0016787
Lal18g0363 320 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 8 1 316 - -
Lal18g0363 320 Pfam Calcineurin-like phosphoesterase 61 252 IPR004843 GO:0016787
Lal18g0363 320 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 316 - -
Lal18g0363 320 Pfam Serine-threonine protein phosphatase N-terminal domain 14 57 IPR031675 -
Lal18g0363 320 SMART pp2a_7 32 302 IPR006186 GO:0016787
Lal18g0363 320 ProSitePatterns Serine/threonine specific protein phosphatases signature. 123 128 IPR006186 GO:0016787
Lal18g0363 320 SUPERFAMILY Metallo-dependent phosphatases 9 303 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0363 Lal-Chr18 3087360 3089983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0363 61 248 Calmodulin-binding Proteins AT5G63870 32.287 6.78e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0363 K06269 - gmx:100805030 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0157 5 1362527 1365799 Lal18g0363 18 3087360 3089983 LSH