Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0357 ATGGCTCATACAAACAACAATGACAAACACAAGAACAATGAGGGACATGGCAACAGAAACAACACCAATCCCAAAGAAAAGGTGGCTATCACACGAGTCCCTAGGGGTCGTCCATTAGGCTCAAAAAACAAACCAAAACCACCCATTCATGTGGTTGAACACATTGATAATGTATTCAAAACCCATGTCATTGAGTTTGCAAGTGGAGTTAACGTTGCTGAAAGTTTACTTCACTTCTCAAAAACCCACCAAATGGGTCTTTGTGTTCTAAGTGCTACTGGAGCTGTTATCAATGCTACTCTTAGAAAAACTCCTGGTTCAATCATGTTACTCCAAGGAAGGTTTGATATAGTATCATTGAATGGTTCATTTTTGCCACTTGGACCAACCCCATCATCATGGTTAACCGTTTTCCTAGCCAGTGGTGGTGGTAAGGGTGGTGTTATTGGAGGCACGGTGGTGGGTCCTTTGATAGCTTCAGGAACAGTTATGGTAATTGTTGGTGCTTTTGGAAGTGCAATTTATGAGAGATTGCCTGAAGAAAATGGTGAGGAAGAGTTTAGTGGTGGTGACAGTTATGGTCCTGGACAAAAGCCAGGTGGCCCTCTCAACCTGTAA 618 0.4272 MAHTNNNDKHKNNEGHGNRNNTNPKEKVAITRVPRGRPLGSKNKPKPPIHVVEHIDNVFKTHVIEFASGVNVAESLLHFSKTHQMGLCVLSATGAVINATLRKTPGSIMLLQGRFDIVSLNGSFLPLGPTPSSWLTVFLASGGGKGGVIGGTVVGPLIASGTVMVIVGAFGSAIYERLPEENGEEEFSGGDSYGPGQKPGGPLNL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0357 205 PIRSF ESCAROLA 1 202 IPR014476 GO:0003680
Lal18g0357 205 ProSiteProfiles PPC domain profile profile. 56 190 IPR005175 -
Lal18g0357 205 MobiDBLite consensus disorder prediction 183 205 - -
Lal18g0357 205 MobiDBLite consensus disorder prediction 1 47 - -
Lal18g0357 205 CDD DUF296 60 140 IPR005175 -
Lal18g0357 205 Gene3D - 60 188 - -
Lal18g0357 205 MobiDBLite consensus disorder prediction 1 16 - -
Lal18g0357 205 Pfam Plants and Prokaryotes Conserved (PCC) domain 60 170 IPR005175 -
Lal18g0357 205 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 186 IPR014476 GO:0003680
Lal18g0357 205 SUPERFAMILY AF0104/ALDC/Ptd012-like 58 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0357 Lal-Chr18 3030330 3030947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0357 30 190 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 54.545 6.90e-44 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0357 - - lang:109325735 286.574