Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0335 ATGGCTGATTCGCTCAGGTTGGTTCATAAGACAGAAGGGACGGCGAAGGAAAACGGGCAAAAGGAAAATGGGAATGGACAGTGCAGAGTGAAACTGAATTTTGATGGGAAATTTGGTTTTGATTTCTATTTACCCATGGAGTGCAATAAGGATGAAGCTACGAGGGCTAAGGAAATTGCTGAATGTAAAATGCAAAGCGGTGACTTTGTAGGGGCACTGAAGTTTGCTTCAAAAGCTAAACGACTTTTTCCTGATATTCAGAACATTGTTCAGATCATTACTGTATGTGAGGTTCACTGTGCTGCACAGAACAAAGTCTTTGGGTCTGACATGGACTGGTATGGAATTCTTCAAACTGAACAAGTGGCTGATGAAGCAACTGTAAAGAAACAGTACAGGAAGCTCGCACTACTTCTTCATCCTGACAAAAATAAATCTGTTGGTGCAGAGGCTGCTTTTAAGTTGATTGGGGAAGCGAACAGGGTCTTGAGCGACCGTGTGAAGCGTTCTTTATATGACAGGAGCCGTAGATTTTCTATTGGTACTGCAGCACCAAATCCTCCATCCCATAACTCGAATGGGAGCTCATTTGTGCCGAAACATGATGGGAATGCTAGAAATTCTCAGAGTACTTTTAATTCACACTCTCCGGATGCTCATCAGTGGGATGAAAAGCTGGCATTCTGGACATCTTGCCAGCATTGTAGTACTAGGTACCAGTACTACAAAACAATTATAAATGCAACCGTACGCTGTCAACAATGTTCTAAATCCTTTATAGCGCGTGATATGGGGTACCAGGGTGTGCCCCCAGGATACATGTGGACATCGTTTCACAAACAGAAAGAGGCTCCAAAGTACATGCCTCCAAAAGCATCAGAAAGTAATGGTGGAAAAACTTGTGGTAGAGGGCAATCAGATAATTTTGTGCGGTCAAATCCTGTATCTATGTCAAAATGCACTGCTGGGGTTGGTGGGCATTGTAAAGTTGAAAAGCATAAAGATGGGTATGTGGCTTCAGGACGGACAAAGGCTGGTATGGGAACGTCTAAGGTTGCTGCATCCAAACCCAAGGAGTCACAAACTTCACCAAATGCTAGAAGTAAGAGAGCAAGGCAGTCAGAATTAGATTCTAGAGATGATAACAAGGTTGAAAATGACAATGGCTTGAAAAATACCAATGTTCGAGAAAATGATGATGGTCCTTATGTAAATAATGCGGCAGTACACCAAAGAAAAGCTTCCAAGGAAAAGCAGCATGTTCCGTGCACAGAAACTGCTCAAGATGGTGATTTTGCAAATCCTTCTAAAAGGCCACGACAATATGGATCATTTAACGCTCCTAAAGTAGAGAAAGGTGAGCATGATCATGTGCAAGTAAAGGAGGCATCCAAGTCAGATGGTGATGGTAGAAAGTCAAACGCAGACAATTGCTCTGCAGTGAATTCAAATTTCCCTCCCCATCAAGAAGAAATCACTTGTCCTGATTCAGACTTCAGTGATTTTGATAAGGATAAGGCAGAGGATTGTTTTGTTGCTAATCAATTCTGGGCCATTTATGATAATTATGATAGCATGCCAAGATACTATGCTCTTGTCAAGAAAGTGTTTTCCCCTTTCAAGTTGCAGATTACTTGGTTGGAACCTGACCCAGATGATCAAGGTGAGATTAATTGGGATGATGCTGGTTTACCTGTGGGTTGTGGTAAGTTCAAACTTGGTGATTCTCTGAGAACTGCTGATCTTGCTATGTTCTCTCATCAGATGCATTGCATAAAAGGCAGTGGCAAAGGTTCTTATCTGGTATTTCCCAAGAAAAGAGAGACTTGGGCACTTTTCAGAGATTGGGATATTGGTTGGAGTTCTAATCGAGAAAAGGATTCAGAATTTCAATTTGAGTACGTGGAAGTCCTATCTGATTTTGATGAAAATGTTGGCATTGAAGTTGCGTATCTTGACAAAGTAAAAGGGTTTGTTAGTCTCTTTCAGCAAACTGTGCAGAATGGAATTAGCTTATTTCGTGTTCCACCTAATGAGCTATATAGGTTCTCACATCGGGTTCCTTCGTATAAGATGACCGGTGATGAAAGGGAAGATGTTCCAAGAGGATCTTTTGAACTTGACCCTGCTGGCCTGCCTAGTAACCTTTTTGTAGTTGGTGATCCTTGTGAAATGAAAATGAAGGATGCAATACTAAATAATGGTGTTAGTTGTTCACACCATGAATCCTCTAAATGTAAAGTGGAACAGGCTATGCCCAATGAAAGTCTTCACGAAGAGAAGCTAAGTAAGAGTAATGATGCTGAAAGAGTTCCGTCAATCCTTAGAAAATCACCAAGGTCAAACAGAAAAGGTATGGGTAATGGTCAAGTAAGCCCTAGTGAATGTGTGATTATAGACGACGATGATGTAGATATTGATCACAAGGACTGTGGTCAACCCGAGGGAACTGCTGCTGCACATAAGGCTAATGAGAAGGTCAAGACACCACGGAAACAAGAGAAAAATAATTATGAAAGAGAGACATTGAAAGTCCGAAGGTCACCTAGAGACATAAGCAAGAAAAATGCTCAAGTAGATAAAGGCGAATGCATAACAAGCAAGGTAACTGACAATCATTCAAATGCCAACAAAAATATGAAGGAAAGCAGTTTTACTCAGTCTGGAGGAAGTGTTCATACACCTTTGACAAAAGCAGGTGAATGTGCAACAAGCAAGGTGACTGATAATCATTCAAATGTCAACAAAAATGTGAAGGGCAGCAGTTTTTCTAAGTCTGGAGGAAGTGTACAATCACCTTTGAAAAAAGATTGCGGTGTCGCAGAAGCATCACGGTATGACTTTAAGAAGGAAAAATCTGAAGAGAAGTTTCAGTGTGGTCAGATATGGGCAATATATGGTGATAAGGATAGGATGCCTGCTGTTTATGCTCAAATTAAGAAGATTGAATCTGCTCGTAACTTCAAGTTGCATGTGTCCCTACTTGAACCTTTCTCTTCACCAAAAGACTCCAAAAGAACAGTGTCTTGTGGCACCTTCGTAGTTAAAAAGGTCAAACCACGAATTCTTTCTCTCTCTGAATTCTCTCATCAACTAAAAGTTGAGCCTGTGACAAATAATTTGTATGAAATTTACCCAAGAAAAGGTGAGGTTTGGGCTCTGTACAAGGACCAGAACTATGATTTGACTTGTTCGAACCCGGGGAGAGGTGAATGTCATATGGTAGAAATATTAGCATATACTGACAATATTATACAAGTTGTTATTCTGACGCCTGTTAGCAGCTCTCAGCCATTTTTCAGGGCTCCTAGAATCCAGAGATCCAAGTCTGGTGTAATTGAAATATTTAAAGAAGAGGTTGGTAGATTTTCTCATCAGATTCCTGCTATTCGGCACAGTGGGGAAGACAATGTTCACCTCAGAGGATGTTGGGAGCTTGATCCTGCTTCAATCCCTGGTTTTATCTGA 3468 0.4106 MADSLRLVHKTEGTAKENGQKENGNGQCRVKLNFDGKFGFDFYLPMECNKDEATRAKEIAECKMQSGDFVGALKFASKAKRLFPDIQNIVQIITVCEVHCAAQNKVFGSDMDWYGILQTEQVADEATVKKQYRKLALLLHPDKNKSVGAEAAFKLIGEANRVLSDRVKRSLYDRSRRFSIGTAAPNPPSHNSNGSSFVPKHDGNARNSQSTFNSHSPDAHQWDEKLAFWTSCQHCSTRYQYYKTIINATVRCQQCSKSFIARDMGYQGVPPGYMWTSFHKQKEAPKYMPPKASESNGGKTCGRGQSDNFVRSNPVSMSKCTAGVGGHCKVEKHKDGYVASGRTKAGMGTSKVAASKPKESQTSPNARSKRARQSELDSRDDNKVENDNGLKNTNVRENDDGPYVNNAAVHQRKASKEKQHVPCTETAQDGDFANPSKRPRQYGSFNAPKVEKGEHDHVQVKEASKSDGDGRKSNADNCSAVNSNFPPHQEEITCPDSDFSDFDKDKAEDCFVANQFWAIYDNYDSMPRYYALVKKVFSPFKLQITWLEPDPDDQGEINWDDAGLPVGCGKFKLGDSLRTADLAMFSHQMHCIKGSGKGSYLVFPKKRETWALFRDWDIGWSSNREKDSEFQFEYVEVLSDFDENVGIEVAYLDKVKGFVSLFQQTVQNGISLFRVPPNELYRFSHRVPSYKMTGDEREDVPRGSFELDPAGLPSNLFVVGDPCEMKMKDAILNNGVSCSHHESSKCKVEQAMPNESLHEEKLSKSNDAERVPSILRKSPRSNRKGMGNGQVSPSECVIIDDDDVDIDHKDCGQPEGTAAAHKANEKVKTPRKQEKNNYERETLKVRRSPRDISKKNAQVDKGECITSKVTDNHSNANKNMKESSFTQSGGSVHTPLTKAGECATSKVTDNHSNVNKNVKGSSFSKSGGSVQSPLKKDCGVAEASRYDFKKEKSEEKFQCGQIWAIYGDKDRMPAVYAQIKKIESARNFKLHVSLLEPFSSPKDSKRTVSCGTFVVKKVKPRILSLSEFSHQLKVEPVTNNLYEIYPRKGEVWALYKDQNYDLTCSNPGRGECHMVEILAYTDNIIQVVILTPVSSSQPFFRAPRIQRSKSGVIEIFKEEVGRFSHQIPAIRHSGEDNVHLRGCWELDPASIPGFI 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0335 1155 Gene3D DnaJ domain 109 222 IPR036869 -
Lal18g0335 1155 MobiDBLite consensus disorder prediction 449 472 - -
Lal18g0335 1155 MobiDBLite consensus disorder prediction 749 795 - -
Lal18g0335 1155 CDD DnaJ 112 165 IPR001623 -
Lal18g0335 1155 Pfam Domain of unknown function (DUF3444) 489 696 IPR024593 -
Lal18g0335 1155 Pfam Domain of unknown function (DUF3444) 940 1135 IPR024593 -
Lal18g0335 1155 MobiDBLite consensus disorder prediction 179 217 - -
Lal18g0335 1155 MobiDBLite consensus disorder prediction 370 394 - -
Lal18g0335 1155 MobiDBLite consensus disorder prediction 749 776 - -
Lal18g0335 1155 MobiDBLite consensus disorder prediction 907 928 - -
Lal18g0335 1155 SUPERFAMILY Chaperone J-domain 107 177 IPR036869 -
Lal18g0335 1155 PRINTS DnaJ domain signature 114 132 IPR001623 -
Lal18g0335 1155 PRINTS DnaJ domain signature 132 147 IPR001623 -
Lal18g0335 1155 PRINTS DnaJ domain signature 148 168 IPR001623 -
Lal18g0335 1155 PRINTS DnaJ domain signature 168 187 IPR001623 -
Lal18g0335 1155 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 46 724 - -
Lal18g0335 1155 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 831 1153 - -
Lal18g0335 1155 MobiDBLite consensus disorder prediction 182 217 - -
Lal18g0335 1155 Pfam DnaJ domain 112 173 IPR001623 -
Lal18g0335 1155 MobiDBLite consensus disorder prediction 869 892 - -
Lal18g0335 1155 PANTHER - 831 1153 - -
Lal18g0335 1155 PANTHER - 46 724 - -
Lal18g0335 1155 MobiDBLite consensus disorder prediction 286 313 - -
Lal18g0335 1155 MobiDBLite consensus disorder prediction 339 492 - -
Lal18g0335 1155 MobiDBLite consensus disorder prediction 473 490 - -
Lal18g0335 1155 ProSiteProfiles dnaJ domain profile. 112 176 IPR001623 -
Lal18g0335 1155 MobiDBLite consensus disorder prediction 809 837 - -
Lal18g0335 1155 SMART dnaj_3 111 168 IPR001623 -
Lal18g0335 1155 MobiDBLite consensus disorder prediction 298 313 - -
Lal18g0335 1155 MobiDBLite consensus disorder prediction 354 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0335 Lal-Chr18 2822092 2827633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0335 49 264 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.081 3.36e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0335 - - lang:109332665 2068.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0335 18 2822092 2827633 Lal18g0335 18 2822092 2827633 ECH