Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0333 ATGAGTTTTGAAATAAGTAATGTACTTTCAAAAATGAAAATGTTATATATGTCAGATCATGGGTCAGTGGTGTCAATGAACATATTTGTGGCACTCCTATGTGCTTGTATTGTCTTAGGACATCTTCTTGAGGAGTATAGATGGATAAATGAATCCATCACTGCACTTTCCATAGGTCTTTGCACTGGTGTAATTATTTTGATGTTTAGTGGTGGTAAAAGCTCACATCTACTGGTTTTCAGTGAAGATCTTTTCTTCATATACCTTCTACCACCAATTATATTTAATGCCGGGTTTCAAGTCAAAAAGAAGCAATTTTTTGTTAACTTCATCACCATTGTCATGTTTGGTGCTGTTGGCACACTCATATGTTGGACCATAATAACATTTGGTGCCATACAAATTTTTAAAAGGATGGGTATTCATTCTCTGGAGTTAGAAGATTATCTAGCAATAGGTGCAATATTTGCTGCAACAGATTCTGTATGCACTTTGCAGCGAAGGAAAAGACGTGGAAGTCATGAAATCATTTATCTCCGTTCTCCTCCAAAACTCAGCTTACAAACAGACACTACAAGTTCGTTTGCGAGGAAGAGAAAGGCTCGAAGCCATAAAACATTCATTTTCCTTTCAAAACTCAATTCGCAAACAGAGCCTAAAGGATCGATAGTACCGAACTTATTAAGGATGGTGATGCAGGTGCTAAACCAGGATGAGACACCTTTATTGTACAGTCTTGTATTTGGTGAGGGTGTTGTGAATGATGCTACATCAGTGGTGCTTTTCAATGCAATCAAAAGTTTTGACCTCAACCATATTGACCCAACAGTTGCTTTGCAATTTCTTGGCAACTTCTTGTATCTGTTTATAGCAAGTACTATGCTTGGTGTTTTGATGTTCAACAAATTTCTCCCTCGTCGCAGGCACTCTACAGATCGCGAGGTTTCCCTTATGATGCTAATGGCATACCTTTCCTATATGCTGGCTGAATTATGTTATCTGAGTGGCATTCTCACTGTATTCTTTTGTGGTATTGTCATGTCACATTATACTTGGCATAATGTGACTGAGAGCTCAAGAACCACTACCAAACATTCTTTTGCAACCTTGTCCTTTGTTGCTGAGACATTTATCTTCCTCTATGTTGGTATGGATGCCTTGGACATTGAAAAATGGAGATTTGTTAGTGATAGCCCTGGAACATCAATTGCTGTGAGTTCAGTACTATTGGGACTAATACTCACTGGAAGAGCAGCTTTTATTTTCCCTTTATCATTCTTATCCAACTTGACTAAAAAATCACCAAATGAGAAAATAAGCTTCAGACAACAAGTAATCATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATAGCACTTGCTTATAATCAGTTCACCATGTCGGGGTATACTCAACAACGATCTAGTGCCATCATGATTACCAGCACCATCACTGTTGTACTTTTCAGCACAGTGGTATTTGGAATGATGACTAAGCCACTGATAAGGTTCTTGGTGCCTCATTCTAAACGCAAAAACAGCATGCAAAACATAAATGACCAAGTATCTTCTTCTCCAACAACATCATCAATGAATGTACCACTTCTTGAAAATTCACTATATAGTGAAGCTGATATTGATGAACTTCAACGTCCAAGTAGTCTTCGTGATTTACTATCAACTCCAACACACACTGTACATTGCTTGTGGCGCAAGTTTGATAATGGGTTTATGCGTCCAGTTTTTGGTGGCAGAGGTTTTGTTCCAATAGCTCCTATTTCACCAACTCAAACAAATAATCTATTCTGA 1812 0.3819 MSFEISNVLSKMKMLYMSDHGSVVSMNIFVALLCACIVLGHLLEEYRWINESITALSIGLCTGVIILMFSGGKSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIVMFGAVGTLICWTIITFGAIQIFKRMGIHSLELEDYLAIGAIFAATDSVCTLQRRKRRGSHEIIYLRSPPKLSLQTDTTSSFARKRKARSHKTFIFLSKLNSQTEPKGSIVPNLLRMVMQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIKSFDLNHIDPTVALQFLGNFLYLFIASTMLGVLMFNKFLPRRRHSTDREVSLMMLMAYLSYMLAELCYLSGILTVFFCGIVMSHYTWHNVTESSRTTTKHSFATLSFVAETFIFLYVGMDALDIEKWRFVSDSPGTSIAVSSVLLGLILTGRAAFIFPLSFLSNLTKKSPNEKISFRQQVIIWWAGLMRGAVSIALAYNQFTMSGYTQQRSSAIMITSTITVVLFSTVVFGMMTKPLIRFLVPHSKRKNSMQNINDQVSSSPTTSSMNVPLLENSLYSEADIDELQRPSSLRDLLSTPTHTVHCLWRKFDNGFMRPVFGGRGFVPIAPISPTQTNNLF 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0333 603 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal18g0333 603 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal18g0333 603 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal18g0333 603 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lal18g0333 603 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 166 - -
Lal18g0333 603 PANTHER SODIUM/HYDROGEN EXCHANGER 2 231 600 - -
Lal18g0333 603 Pfam Sodium/hydrogen exchanger family 231 503 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lal18g0333 603 Pfam Sodium/hydrogen exchanger family 30 166 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lal18g0333 603 PANTHER SODIUM/HYDROGEN EXCHANGER 231 600 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lal18g0333 603 PANTHER SODIUM/HYDROGEN EXCHANGER 7 166 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lal18g0333 603 Gene3D - 145 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0333 Lal-Chr18 2807904 2814524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0333 232 601 Antiporters AT3G05030 68.947 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0333 - - vvi:100232960 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0333 18 2807904 2814524 Lal13g0678 13 4381589 4387303 PCT
Lal18g0333 18 2807904 2814524 Lal24g0528 24 3698952 3704950 PCT
Lal13g0678 13 4381589 4387303 Lal18g0333 18 2807904 2814524 PCT
Lal24g0528 24 3698952 3704950 Lal18g0333 18 2807904 2814524 PCT