Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0330 ATGAAGAGCATTTTGAAGAAACTCCACATAGGTACCAACCACCACCATCACTCTAACCGATCCACTGAACTTCCTAACGCATCCTCTTCCTCCGTTGCACCACCACCGTCTTCCGCCACCGATGATCCTGGTGTTTCCCCCTCCAATCTTTCTCCGGCGGTTACAGTTTCTAATCGGCAAGATTATTTCTCATCGGAGGAGGAGTTTCAGGTTCAGCTAGCCCTCGCCATAAGCGCTTCTTCAAATTCGGAGTTCAAAGATGATCATAGCTTCGGAAGCCGTAAAATCGATTCCACGAGGAAGGAGGAAGGTGCGGCGGACGCGCTGTCGAGGCGTTATTGGGAATACAATGTGCTTGACTATGAGGAAAAAGTAATAGATGGTTTTTATGATGTATATGGGCTCTGTACCGATATAGCAATGCAAGGAAAGATGCCATCTCTGACAGATCTTGAAGCAAAACCTGGAAGTTCTGGCTATGAAGTTGTCCTAGTTGACTGTGCAATTGATCCTGCTCTTGAAGAGCTGATGCAAATTGCACATTGTATCACATTAGACTGCCCTGTCACCGAGGTTGTTGTTTTGGTACAAAGGCTTGCTGAACTTGTTACAGGCCATATGGGTGGTCCTGTAAAGGATGCTAATGTTATATTGGCAAGATGGGCAGAAAGAAGTACAGAGCTTAGGACATCTGAAAACATGAGTGTGTTGCCTCTTGGGTCCATAAATATTGGGCTTTCCAGACATCGTTCTTTGCTTTTTAAGGTATTAGCTGACAATGTCAAAATTCCTTGTAGACTTGTAAAAGGTAGTCATTATACTGGTGTCGAGGATGATGCTGTCAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCCCCTGGAACGCTTATCCCAACTGATATTTCAACTGTGAAGGATCCTTCCTTTAATCCTTACAACCCCAAGGTTTTGCCAAGTTTACCTTCTACTAAGGAAACTGATTTTTATTACACAAGACTAGTGCCATCCCATGGTGAAGGTAGTAGTCAGAATTCACCTTTGAATGGAAAATCATATTTTGACCAGCCAGATTACATGCCTTCAAAATTTGGTCTCAATGGAGATTCTGGTGTTAGTCCCTCAAAAATGCTTGATAGAGTGACTCCTAACCAAGTAGAAAATATTGCACAATCATCTGGTGCTTCTCTGTACAAGGGGACTCATGGAATAAATGTGGCTGGTGATGGGATTAGACTGAATGTCAATGTTGTACCATATGGCCAGAAGAGTTCTGATGACTCTCAGAACCTTTTTGCTGACCTTAACCCCTTCCAGATAAAAGGAGCTAGTAAGACCTCTGGTCATAGCAGAACAGTAGAAAATAAAGTTCTCGAGGTTCAGAGTACAAGAAATAATACTGTTTGTGGTAGACACGCTGACCATTTGAAGTGGAAGAATGGTTATCCTTACAATGAAGTCCCTAGGAAAATTAATTGTGATCCTAATGCATACAACTTTTCCTATAGTTCTTCCGTATCTGAAAAGATTGATCAAAGTGGTTCCAAATCTTCAAACAATTCAAATTTAAGTAATGATACGAATGTTCCAAAATTGGCCCAAGTTACTGTTTCAGTTGCACCATCTGGTGTAAATGAACTGAAGAGGTTTGAGGATCTGAATGTTGATTGTAACAGAGGCAAATTGGAAAGTTCTCGAAATAGCATGTTAGATGTGGTTAAAGAATGTGAAAACGTTGAAATTGGTCATCTTGACCAGAGGAAGTTCGCACATGAAAGATTCATGGGGAAACATTTAAAATTAAAGGATCCAGATAGTTGTAGCTCCCCAGTTGATTCCAATTCAAAAAAGATTGATCGAATGTTGGATGATATAGATGTCAGTGAATGTGAGATTCCATGGGAAGATTTGGTTATTGGTGAAAGAATTGGTCTAGGTTCATATGGTGAAGTATTCCGTGCTGACTGGAATGGCACTGAGGTTGCTGTGAAGAAATTTTTGGATCAGGATTTTTCAGGCGATGCCTTGTCAGAATTCAAAAGAGAAGTACGGATAATGCGTAGACTGCGTCATCCAAATATTGTTCATTTTATTGGTGCTGTTACTCGTCCTCCCAATCTCTCAATCATTACAGAGTTTCTTCCAAGAGGAAGCTTGTATCATATTCTTCATCGTCCTCATTGTCAGATCGATGAGAAACAAAGGATAAAAATGGCTCTAGATGTGGCCCGGGGCATGAATTGCTTACATTCCAGCACACCTACAATTGTTCACCGAGATCTGAAGTCCCCAAATCTTTTGGTTGATGAGAACTGGAATGTTAAGGTATGTGATTTCGGGTTGTCACGCTTGAAACACAACACATTCTTGTCATCCAAGTCAACTGCTGGAACGCCCGAATGGATGGCTCCTGAAGTTCTCCGCAATGAGCCCTCAAATGAAAAATGTGACGTTTATAGTTTTGGAGTCATTCTATGGGAGCTTGCCACTTTAAAGATGCCTTGGACTGGAATGAATCCTATGCAAGTTGTTGGTGCAGTGGGTTTTCAAAACCGTCGCCTTGATATCCCTAAGGATGTTGACCCTTTAGTTGCAAGAATAATCTGGGAATGTTTGCAACAGGATCCGAATTTGCGTCCTTCATTTGCACAGCTCACAGTGACTCTAAAGCCCCTGCAACGTCTAGTTTTCTCATCTCATCAAGACCAGCTAGTTTCTCCAATGTCACAAGAGGTTTCTGTAAATTTTATCCCTTGA 2775 0.4162 MKSILKKLHIGTNHHHHSNRSTELPNASSSSVAPPPSSATDDPGVSPSNLSPAVTVSNRQDYFSSEEEFQVQLALAISASSNSEFKDDHSFGSRKIDSTRKEEGAADALSRRYWEYNVLDYEEKVIDGFYDVYGLCTDIAMQGKMPSLTDLEAKPGSSGYEVVLVDCAIDPALEELMQIAHCITLDCPVTEVVVLVQRLAELVTGHMGGPVKDANVILARWAERSTELRTSENMSVLPLGSINIGLSRHRSLLFKVLADNVKIPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPTDISTVKDPSFNPYNPKVLPSLPSTKETDFYYTRLVPSHGEGSSQNSPLNGKSYFDQPDYMPSKFGLNGDSGVSPSKMLDRVTPNQVENIAQSSGASLYKGTHGINVAGDGIRLNVNVVPYGQKSSDDSQNLFADLNPFQIKGASKTSGHSRTVENKVLEVQSTRNNTVCGRHADHLKWKNGYPYNEVPRKINCDPNAYNFSYSSSVSEKIDQSGSKSSNNSNLSNDTNVPKLAQVTVSVAPSGVNELKRFEDLNVDCNRGKLESSRNSMLDVVKECENVEIGHLDQRKFAHERFMGKHLKLKDPDSCSSPVDSNSKKIDRMLDDIDVSECEIPWEDLVIGERIGLGSYGEVFRADWNGTEVAVKKFLDQDFSGDALSEFKREVRIMRRLRHPNIVHFIGAVTRPPNLSIITEFLPRGSLYHILHRPHCQIDEKQRIKMALDVARGMNCLHSSTPTIVHRDLKSPNLLVDENWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKMPWTGMNPMQVVGAVGFQNRRLDIPKDVDPLVARIIWECLQQDPNLRPSFAQLTVTLKPLQRLVFSSHQDQLVSPMSQEVSVNFIP 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0330 924 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 55 916 - -
Lal18g0330 924 Gene3D Phosphorylase Kinase; domain 1 636 720 - -
Lal18g0330 924 CDD STKc_MAP3K-like 649 895 - -
Lal18g0330 924 MobiDBLite consensus disorder prediction 1 15 - -
Lal18g0330 924 SMART serkin_6 643 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0330 924 MobiDBLite consensus disorder prediction 515 535 - -
Lal18g0330 924 MobiDBLite consensus disorder prediction 1 53 - -
Lal18g0330 924 ProSitePatterns Protein kinases ATP-binding region signature. 649 671 IPR017441 GO:0005524
Lal18g0330 924 ProSiteProfiles Protein kinase domain profile. 643 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0330 924 PRINTS Tyrosine kinase catalytic domain signature 717 730 IPR001245 GO:0004672|GO:0006468
Lal18g0330 924 PRINTS Tyrosine kinase catalytic domain signature 756 774 IPR001245 GO:0004672|GO:0006468
Lal18g0330 924 PRINTS Tyrosine kinase catalytic domain signature 803 813 IPR001245 GO:0004672|GO:0006468
Lal18g0330 924 PRINTS Tyrosine kinase catalytic domain signature 822 844 IPR001245 GO:0004672|GO:0006468
Lal18g0330 924 PRINTS Tyrosine kinase catalytic domain signature 866 888 IPR001245 GO:0004672|GO:0006468
Lal18g0330 924 PANTHER SERINE-THREONINE PROTEIN KINASE 55 916 - -
Lal18g0330 924 MobiDBLite consensus disorder prediction 22 53 - -
Lal18g0330 924 Pfam Protein tyrosine and serine/threonine kinase 644 894 IPR001245 GO:0004672|GO:0006468
Lal18g0330 924 Pfam Ethylene-responsive protein kinase Le-CTR1 106 304 - -
Lal18g0330 924 SUPERFAMILY Protein kinase-like (PK-like) 625 891 IPR011009 -
Lal18g0330 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 762 774 IPR008271 GO:0004672|GO:0006468
Lal18g0330 924 Gene3D Transferase(Phosphotransferase) domain 1 722 905 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0330 Lal-Chr18 2775740 2785609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0330 1 879 MAP Kinase Kinase Kinase AT1G08720 53.637 0.0 861
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lal18g0330 PK_Tyr_Ser-Thr 1.6e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0330 - - aprc:113870732 1285.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0330 18 2775740 2785609 Lal18g0330 18 2775740 2785609 ECH