Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0326 ATGAAGAAGAACACACAGCACCTTTCAGGCGATAAAAGCTTTCAACAATTCTTCAAAGTTTTCTTACCCCAAACAAGTTCTACTCAGTTGCGCATACCAAGGGCTTTCAACAAGTTCATGAATGGAATTACAACAAGTGAGGTCACTCTTATGGATCATGATAATAACTCTTGGGACATTGATATGGCAAGAATAGAAGATACTTTTATTTTTAAAAATGGATGGCAACGATTTGCTAAAGAAAAATGTTTAGAAGAAGGGGAATTCTTGGTTTTTGAGTATGATGGCTACTCCACATTTTATGTGAAGATATTTTCCAAAACTGGGTGTAGAAAAGAATTTCAAAATTCTAATAAAATTGTTCCTATTCCAATCTTGGATGAAGGTTGTGACCAAATTTGTAAAGAAAATAAGCGAGGTCGTAAACGCAAATATCCATCAATAGATCTCCAAATAAATCAAAAATCAAATTCAGGTCCATCTAAAGTTGATAAAAAGAGCAAATCAACAAGACCTAATGTTGAAGGCTATAAGAAAAATTCAACTGATTCTGCAAAGTGTGCTCCACCAAACAACCCTAATTTCATAGTCCATTTTTCTTCCATCAGAAAACTAAGTAGAGTGGAAATTCATAAGACAATAATGAAGAAATGGAACATGAAATTGAGGTCAACATTGAGTCTAAAAAATGAGAATGGAAAAGTATGGTTGGTTAGGGTTTCTACCACTCTTAATGGTCGTAATTATTTAGATACTGGGTTGTCTGATTTCGTGAAGAGTAACAATATTACGAAAGGAAACCAATGTGAGTTTGAGTTTGTCATTGGTCAAGGAAATGTAGTCAATGAAATTCTTGTTCATGCCCCTAAGTGA 873 0.3391 MKKNTQHLSGDKSFQQFFKVFLPQTSSTQLRIPRAFNKFMNGITTSEVTLMDHDNNSWDIDMARIEDTFIFKNGWQRFAKEKCLEEGEFLVFEYDGYSTFYVKIFSKTGCRKEFQNSNKIVPIPILDEGCDQICKENKRGRKRKYPSIDLQINQKSNSGPSKVDKKSKSTRPNVEGYKKNSTDSAKCAPPNNPNFIVHFSSIRKLSRVEIHKTIMKKWNMKLRSTLSLKNENGKVWLVRVSTTLNGRNYLDTGLSDFVKSNNITKGNQCEFEFVIGQGNVVNEILVHAPK 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0326 290 CDD B3_DNA 17 106 IPR003340 GO:0003677
Lal18g0326 290 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS01G0723500-LIKE ISOFORM X1 9 278 - -
Lal18g0326 290 SUPERFAMILY DNA-binding pseudobarrel domain 189 278 IPR015300 -
Lal18g0326 290 PANTHER B3 DOMAIN-CONTAINING 9 278 - -
Lal18g0326 290 Pfam B3 DNA binding domain 17 107 IPR003340 GO:0003677
Lal18g0326 290 Pfam B3 DNA binding domain 200 276 IPR003340 GO:0003677
Lal18g0326 290 Gene3D - 187 287 IPR015300 -
Lal18g0326 290 Gene3D - 9 110 IPR015300 -
Lal18g0326 290 SUPERFAMILY DNA-binding pseudobarrel domain 13 110 IPR015300 -
Lal18g0326 290 SMART B3_2 194 288 IPR003340 GO:0003677
Lal18g0326 290 SMART B3_2 17 108 IPR003340 GO:0003677
Lal18g0326 290 ProSiteProfiles B3 DNA-binding domain profile. 15 108 IPR003340 GO:0003677
Lal18g0326 290 MobiDBLite consensus disorder prediction 153 185 - -
Lal18g0326 290 ProSiteProfiles B3 DNA-binding domain profile. 193 290 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0326 16 286 B3 DNA Binding Superfamily AT5G66980 28.247 5.89e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lal18g0326 B3 1.7e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0326 - - lang:109328674 484.182