Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0319 ATGGCCGCCGCCGCCGCCGCCGCCGCCGCCAATGCTTCCCCGCGCCACCTTTCCCAGAAGGAGGCTGATATCCAATTAATGTTAGCCGCTGAAGTTCATTTAGGCACTAAAAACTGCGATTTCCAAATGGAACGTTACATCTTCAAACGCCGAAATGATGGTATTTATGTGATTAATCTCGGAAAGACATGGGAGAAGCTTCATTTGGCAGCTAGGGTTATTGTTGGAATTGAAAACCCTAATGATATTATTGTTCAATCAGCAAGACCTTATGGTCAAAGAGCTGTTCTGAAATTTGCTCAATATACTGGTGCTCATGCTATTGCTGGAAGACATACACCTGGTACTTTCACTAATCAGCTTCAAACTTCTTTCACTGAACCTCGTCTTCTCATTTTAACTGATCCCAGAACTGATCATCAGCCTATTAAGGAAGCTGCTCTTGGAAATATTCCAACCATTGCTTTCTGCGACACTGATTCACCTATGCGCTATGTTGACATTGGTATTCCTGCCAATAACAAGGGCAAACACAGCATTGGTTGTCTGTTTTGGCTCCTTGCAAGGATGGTGTTGCAAATGCGTGGTACTATTCGCCCGGGCCTTAAATGGGATGTCATGGTGGATTTGTTCTTCTATAGAGAACCCGAGGAGGCAAAGCAGCAAGAGGAGGATGAAGTGATACCAGGTGCAGATTATGCTATTCAAGACTTCAATGCATCTGCTATTGGTGGCATTGCTGCTGATGGTCAGTGGCCTACTGCAGTCGATTCATCTTGGACCGAGGCTGTTCCACAACCTATTCCTGCAGTTCCTAGTGCTGTTACTTGGACTGCCGCCCCAGAAGCTGGAGAATGGGGAGATTCTGTTGCACCTCCACAACAAATCCTTGCACCTGCAATCGAAAATGTCCAACCTTCTGGCTGGGAATGA 933 0.463 MAAAAAAAAANASPRHLSQKEADIQLMLAAEVHLGTKNCDFQMERYIFKRRNDGIYVINLGKTWEKLHLAARVIVGIENPNDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFTEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEDEVIPGADYAIQDFNASAIGGIAADGQWPTAVDSSWTEAVPQPIPAVPSAVTWTAAPEAGEWGDSVAPPQQILAPAIENVQPSGWE 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0319 310 ProSitePatterns Ribosomal protein S2 signature 2. 128 152 IPR018130 GO:0003735|GO:0005840|GO:0006412
Lal18g0319 310 ProSitePatterns Ribosomal protein S2 signature 1. 24 35 IPR018130 GO:0003735|GO:0005840|GO:0006412
Lal18g0319 310 Pfam Ribosomal protein S2 27 120 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lal18g0319 310 Pfam Ribosomal protein S2 126 191 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lal18g0319 310 PRINTS Ribosomal protein S2 signature 24 42 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lal18g0319 310 PRINTS Ribosomal protein S2 signature 54 63 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lal18g0319 310 PRINTS Ribosomal protein S2 signature 103 120 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lal18g0319 310 PRINTS Ribosomal protein S2 signature 128 145 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lal18g0319 310 PRINTS Ribosomal protein S2 signature 145 156 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lal18g0319 310 PRINTS Ribosomal protein S2 signature 166 180 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lal18g0319 310 TIGRFAM uS2_euk_arch: ribosomal protein uS2 20 215 IPR005707 GO:0003735|GO:0006412|GO:0015935
Lal18g0319 310 CDD RPS2 27 193 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lal18g0319 310 Gene3D - 23 227 - -
Lal18g0319 310 Hamap 40S ribosomal protein SA [rps-0]. 11 263 IPR027498 GO:0003735|GO:0006412|GO:0015935
Lal18g0319 310 PANTHER 40S RIBOSOMAL PROTEIN SA 12 280 - -
Lal18g0319 310 PANTHER 40S RIBOSOMAL PROTEIN SA 12 280 IPR005707 GO:0003735|GO:0006412|GO:0015935
Lal18g0319 310 SUPERFAMILY Ribosomal protein S2 19 209 IPR023591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0319 Lal-Chr18 2675654 2678444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0319 1 284 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 71.331 4.67e-149 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0319 K02998 - gmx:548014 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0319 18 2675654 2678444 Lal18g0319 18 2675654 2678444 ECH
Lal6g0575 6 3694615 3697165 Lal18g0319 18 2675654 2678444 LSH
Lal22g0518 22 3436860 3439417 Lal18g0319 18 2675654 2678444 LSH