Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0308 ATGGAGGAAGGTAGAAGGGTGGTTGTGCTGTTCATCAGTACTTGCATTCTTCTTTGGATGACCATTGTTGTCAATGGTGACACAGATCCAAATGATGTTACTTCTATAAGGATTTTGTTTCAAGGTCTGAACTCGGCACCCCAGCTAGGTTGGCCTGCTAATGGTAATGGTGATGATCCATGTGGACAGTCTTGGAAAGGAATTACGTGCTTAGTTAACCGAGTTACCGAGATTAACTTATCTAATCTTGGACTGACTGGAACATTGCCTTACGGATTAAAACCCTTGACATCTCTCACAAACCTAGACGTGAGTAACAACAATCTTGGAGGCACCATACCGTACGAACTTCCTCAAAATGTGAAGCACTTAAATCTTGCTAATAATAACCTCACTGGGAATATCCCTTTCTCCTTTTCTGATCTGACCTCTCTTACGGACCTGAATCTTGGTCACAATCAGCTCCAGCAAGAACTGAGTTTTGACTTTTCAAGGCTCTCTACCCTCTCCACATTGGATGTCTCTTTCAATGCTTTGACAGGTGACCTCCCTCAGAGTTTGAGCTCGCTTTCAGACATAACCTCCATGTATATGCAAAACAACCAGTTCACCGGCACCATCGATATCCTTGCTAATCTGCCTCTTAAATTACTGAATGTGGAAAACAATCATTTTACAGGATGGATACCGGTACAATTGCAAAACATAAACCTACAGACCGGTGGTAATGCATGGAGCTCAGGACCTGCACCCCCGCCGCCTCCTGGGACTCCTCCAGCGCCTAAAAGTAACCAACATCATAAACCTGGTGGTGGGAATACCAGCCACTCTGGTTCTGACAGTGGCACAAGTGATGGGGGTAAAAAGTCTGGTATAGGAGGTGGTGGCATAGCTGGAATTTTGATCTCCATCGTTGTCATTGGGGCAATAGTAGCGTTCTTTCTGGTGAAGAGAAGAAAATCCAAGAAGTCATCTTCAGATGTAGAAAAGCTGGACAACCAGCCCTTTGCTTCTCTTCCTTCAAATGAACTACATCATGAAGTGAAGTTGCAAACTTCCTCGGTAATTGACGTGAAGACGTTTGATACTTCTTCCTCGATAAATCTGAAACCCCCACCTATTGATCGTCATAAATCATTTGATGAAAATGAATTGTCAAAGAAGCCCATTGTTGTCAAGAAAACTGTAAAAGCTCCTGCGAATTTGAAATCATATTCTATAGCCGATCTGCAGATTGCCACTGGAAGCTTCAATGTGGATCACCTTGTTGGTGAGGGATCTTTTGGACGTGTTTACCGTGCTCAATTTGATGATGGGAAGGTTCTTGCAGTGAAGAAGATAGACTCTTCTGTCCTGCCGAGTAATTTGTCTGAAGATTTTACAGATATAGTTTCAAACATCTCCCATTTACATCATCCAAATGTGACTGAGCTTGTAGGTTATTCTTCAGAGTATGGACAACATATCTTAGTCTACGAGTTTCACAAAAATGGTTCACTGCATGACTTCCTTCACCTAGAAGATGAATATAGTAAACCATTGATATGGAATACACGTGTCAAGATTGCTTTGGGAACTGCACGAGCTTTAGAGTACCTACATGAAGTTTGTTCGCCGTCAGTTGTTCATAAGAATATTAAGTCGGCCAACATATTGCTTGATGCAGAGCTTAGTCCTCATCTTTCAGACAGTGGATTGGCAAGCTATATTCCAAATGCAGACCAGGTATTGAACCATAATATTGGATCTGGATATGATGCACCTGAAGTTGCTTTGTCTGGTCAGTATACCCTGAAAAGTGATGTCTATAGCTTTGGAGTTGTCATGTTGGAGCTTCTCAGTGGGTGGAAACCATTTGATAGCTCAAGGCCAAGATTGGAGCAGTCTTTGGTTAGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTACACTGAAAGGGTTATACCCTGTTAAATCTCTTTCACGTTTTGCCGATGTTATTGCTCTCTGCGTTCAGCCGGAGCCTGAATTCCGACCACCTATGTCAGAAGTGGTTCAAGCACTCGTTCGGTTGGTGCAACGAGCAAACATGAGCAAGAGAACATTTGGATCTGATCAAGGAGGAACCCCTCGAGGGAGTGATGAGCCTGGCTTACGAGACTTCTAA 2169 0.4311 MEEGRRVVVLFISTCILLWMTIVVNGDTDPNDVTSIRILFQGLNSAPQLGWPANGNGDDPCGQSWKGITCLVNRVTEINLSNLGLTGTLPYGLKPLTSLTNLDVSNNNLGGTIPYELPQNVKHLNLANNNLTGNIPFSFSDLTSLTDLNLGHNQLQQELSFDFSRLSTLSTLDVSFNALTGDLPQSLSSLSDITSMYMQNNQFTGTIDILANLPLKLLNVENNHFTGWIPVQLQNINLQTGGNAWSSGPAPPPPPGTPPAPKSNQHHKPGGGNTSHSGSDSGTSDGGKKSGIGGGGIAGILISIVVIGAIVAFFLVKRRKSKKSSSDVEKLDNQPFASLPSNELHHEVKLQTSSVIDVKTFDTSSSINLKPPPIDRHKSFDENELSKKPIVVKKTVKAPANLKSYSIADLQIATGSFNVDHLVGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPSNLSEDFTDIVSNISHLHHPNVTELVGYSSEYGQHILVYEFHKNGSLHDFLHLEDEYSKPLIWNTRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDAELSPHLSDSGLASYIPNADQVLNHNIGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGWKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPTLKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFGSDQGGTPRGSDEPGLRDF 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0308 722 MobiDBLite consensus disorder prediction 247 262 - -
Lal18g0308 722 ProSiteProfiles Protein kinase domain profile. 417 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0308 722 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 18 716 - -
Lal18g0308 722 Gene3D Transferase(Phosphotransferase) domain 1 496 708 - -
Lal18g0308 722 Gene3D Ribonuclease Inhibitor 40 181 IPR032675 -
Lal18g0308 722 Pfam Protein tyrosine and serine/threonine kinase 419 689 IPR001245 GO:0004672|GO:0006468
Lal18g0308 722 MobiDBLite consensus disorder prediction 240 288 - -
Lal18g0308 722 ProSitePatterns Protein kinases ATP-binding region signature. 423 446 IPR017441 GO:0005524
Lal18g0308 722 MobiDBLite consensus disorder prediction 700 722 - -
Lal18g0308 722 Gene3D Phosphorylase Kinase; domain 1 378 494 - -
Lal18g0308 722 PANTHER OS01G0253100 PROTEIN 18 716 IPR045271 GO:0004714|GO:0006468
Lal18g0308 722 SUPERFAMILY Protein kinase-like (PK-like) 401 689 IPR011009 -
Lal18g0308 722 MobiDBLite consensus disorder prediction 267 286 - -
Lal18g0308 722 Gene3D Ribonuclease Inhibitor 182 247 IPR032675 -
Lal18g0308 722 SUPERFAMILY L domain-like 48 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0308 Lal-Chr18 2543176 2550329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0308 1 706 Strubbelig Receptor Gene Family AT1G53730 62.953 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lal18g0308 PK_Tyr_Ser-Thr 1.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0308 - - gmx:100807707 1091.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0308 18 2543176 2550329 Lal18g0308 18 2543176 2550329 ECH
Lal6g0592 6 3789951 3797188 Lal18g0308 18 2543176 2550329 LSH
Lal22g0536 22 3579051 3585804 Lal18g0308 18 2543176 2550329 LSH