Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0304 ATGGTTCTCAAGACTGAGCTTTGTCGATTCAGTGGTGCCAAAATATACCCAGGGAGAGGAATCCGATTTATTCGCAGTGATTCTCAGATGCTCAGCATTAGATTTTACGGTGCCACGATGTTGATTAAACAGGTCTTCCTGTTTGTGAATTCGAAATGCAAGCGATACTTTCACAACCGTTTGAAGCCATCGAAGCTCACATGGACTGCCATGTATAGGAAGCAACACAAGAAGGATGCTGCTCAAGAAGCTGTGAAGAAGAAGCGTCGTGCTACCAAAAAGCCATACTCTAGGTCTATTGTTGGTGCTACTTTGGAAGTTATCCAGAAAAGAAGAACCGAGAAGCCAGAGGTTCGAGATGCTGCCAGAGAAGCTGCTCTTCGTGAAATTAAAGAGAGGATCAAGAAGACAAAGGATGAGAAGAAGGCTAAGAAGGCAGAAGTAGTGGCCAAGTCACAGAAATCAGGCAAAGGTAATGTTTCAAAGGGTGCTGCACCAAAGGGTCCCAAACTTGGTGGCGGAGGTGGGAAACGCTAG 537 0.4562 MVLKTELCRFSGAKIYPGRGIRFIRSDSQMLSIRFYGATMLIKQVFLFVNSKCKRYFHNRLKPSKLTWTAMYRKQHKKDAAQEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVVAKSQKSGKGNVSKGAAPKGPKLGGGGGKR 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0304 178 Pfam Ribosomal protein L24e 4 31 IPR000988 -
Lal18g0304 178 Pfam Ribosomal protein L24e 44 82 IPR000988 -
Lal18g0304 178 CDD Ribosomal_L24e_L24 3 71 IPR000988 -
Lal18g0304 178 Gene3D - 84 153 - -
Lal18g0304 178 PANTHER 60S RIBOSOMAL PROTEIN L24 3 178 IPR000988 -
Lal18g0304 178 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Lal18g0304 178 MobiDBLite consensus disorder prediction 135 178 - -
Lal18g0304 178 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 73 - -
Lal18g0304 178 MobiDBLite consensus disorder prediction 135 151 - -
Lal18g0304 178 Coils Coil 127 147 - -
Lal18g0304 178 Gene3D Ribosomal protein L24e 3 79 IPR038630 -
Lal18g0304 178 PANTHER 60S RIBOSOMAL PROTEIN L24 3 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0304 Lal-Chr18 2509781 2511363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0304 1 171 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 79.070 1.10e-83 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0304 K02896 - dcr:108225184 229.18