Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0302 ATGGGCCAGTGTTACGGCAAGACAAACCCAAATTCCGACAACGAAAATGTTCCAAACGTAACCACCTCCGCCTCCGGCGGTGACGGTTACCGTTCTCCTCTTCCTGGTTATCAGTCAGTTAAGAACACGCCGGCGAGGTCGTCGGCTTCTCAGGCGAGCCCGTGGCCAAGCCCGTACCCGCACGGGGAAGGGATGTCACCATCGCCGGCGAGGGGGACGACGCCGAGGAGATTTTTTAGGCGGGCGTTCCCGCCGCCGTCTCCGGCGAAGCATATAAGGGCGTCGCTGGTGAAGCGGTTCGGGAAGGGGAAGCAGACGGTGAAGGAGGGGACAATACCGGAGGAGGGTCGGGAGGCGGAGGCGGTGGAGGAGGAGGAGGAGGAGGAAGAGGCACTTGATAAGAGGTTTGGGTATGGGAAGAATTTTGGAGGAAAATATGAAATGGGGAAAGAAATTGGGAGAGGGCATTTTGGTCATACTTGCTTTGCAAGGGGTAAGAAGGGTGAGCTCAAGGACCACCGTCTTGCTGTTAAAATCATTTCCAAGGCTAAGATGACCACAGCAATAGCAATTGAAGATGTTCGTAGAGAGGTGAAGCTATTAAAAGCTCTATCCGGTCATAAGAATCTCGTCAGATTTCATGATGCTTGCGAGGATGCTAATAATGTGTACATTGTTATGGAATTGTGTGAAGGCGGGGAGCTTCTTGACCGAATTCTGTCGAGGGGAGGAAGGTATACAGAGGAGGATGCGAAGGTTATAGTTTTGCAGATTCTAAGCGTAGTTGCCTTTTGTCATCTTCAAGGTGTTGTGCACCGTGACTTGAAGCCTGAGAATTTCTTATTCACTTCAAGAAGTGAAGATGCTGATATGAAGCTTATTGATTTTGGTCTATCTGACTTCATCAGACCAGATGAACGGTTGAATGACATTGTTGGGAGTGCATATTATGTTGCCCCTGAGGTCCTACATAAGTCATATAGTTTGGAAGCAGATATATGGAGTATTGGTGTTATTACCTACATCTTGCTATGCGGAAGTCGACCGTTTTGGGCACGAACAGAATCTGGAATTTTTCGCTCTGTGCTCAGAGCTGATCCTAACTTCGATGATTTAACTTGGCAATCTGTATCTCCAGAGGCCAAGGACTTTGTAAAAAGGCTCCTAAACAAGGACTACAGGAAAAGAATGTCTGCTGCACAAGCTCTAGCTCATCCTTGGTTGAGGAACGACAGCCGCCCTATCCCTTTGGACATATTAATTTATAAATTAGTGAAGTCTTATCTTCATGCAACACCATTCAAACGTGCAGCAGTGAAGGCCCTTTCAAAAGCATTGACAGAGAACGAGTTGGTGTATCTTGGAGCACAATTCAAACTATTGGAACCAAATAGAGATGGATATGTCTCTCTCGAAAATTTCAAATTGGTTATATGCTGCTTCCCTATTAATCCTTCCAGTCTTGTTGTGGTTGAGTTAAAAAAAAAAATTGCTCTTGCACGACTTGCGACTGATGCTATGAAGGAGTCAAGGGTTCTTGACATCATACACATGATGGAACCACTTGCCTATAGAAAGATGGATTTTGAAGAATTTTGTGCAGCTGCAACAAGCACATATCAATTGGAGGCACTTGATAGATGGGAAGATATCGCTAACACTGCATTTGAGCATTTTGAGATAGAGGGCAACCGAGTCATATCCATTGAAGAATTAGCAAGAGAGTTGAATCTTGGTCCTTCAGCTTATTCAATTCTAAAAGATTGGATAAGAAATGATGGAAAGCTTAATTTAGTTGGATATACAAAATTTTTGCATGGTGTGACTCTCAGAACTTCAAACCCAAGACACCGTTAG 1857 0.4534 MGQCYGKTNPNSDNENVPNVTTSASGGDGYRSPLPGYQSVKNTPARSSASQASPWPSPYPHGEGMSPSPARGTTPRRFFRRAFPPPSPAKHIRASLVKRFGKGKQTVKEGTIPEEGREAEAVEEEEEEEEALDKRFGYGKNFGGKYEMGKEIGRGHFGHTCFARGKKGELKDHRLAVKIISKAKMTTAIAIEDVRREVKLLKALSGHKNLVRFHDACEDANNVYIVMELCEGGELLDRILSRGGRYTEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHKSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFDDLTWQSVSPEAKDFVKRLLNKDYRKRMSAAQALAHPWLRNDSRPIPLDILIYKLVKSYLHATPFKRAAVKALSKALTENELVYLGAQFKLLEPNRDGYVSLENFKLVICCFPINPSSLVVVELKKKIALARLATDAMKESRVLDIIHMMEPLAYRKMDFEEFCAAATSTYQLEALDRWEDIANTAFEHFEIEGNRVISIEELARELNLGPSAYSILKDWIRNDGKLNLVGYTKFLHGVTLRTSNPRHR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0302 618 Gene3D Transferase(Phosphotransferase) domain 1 235 416 - -
Lal18g0302 618 MobiDBLite consensus disorder prediction 103 117 - -
Lal18g0302 618 SUPERFAMILY EF-hand 434 606 IPR011992 -
Lal18g0302 618 CDD STKc_CAMK 145 407 - -
Lal18g0302 618 ProSitePatterns Protein kinases ATP-binding region signature. 152 178 IPR017441 GO:0005524
Lal18g0302 618 MobiDBLite consensus disorder prediction 36 55 - -
Lal18g0302 618 Gene3D Phosphorylase Kinase; domain 1 139 234 - -
Lal18g0302 618 MobiDBLite consensus disorder prediction 103 130 - -
Lal18g0302 618 SMART serkin_6 146 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0302 618 SUPERFAMILY Protein kinase-like (PK-like) 143 430 IPR011009 -
Lal18g0302 618 PANTHER SERINE/THREONINE-PROTEIN KINASE 51 611 - -
Lal18g0302 618 MobiDBLite consensus disorder prediction 1 28 - -
Lal18g0302 618 MobiDBLite consensus disorder prediction 1 89 - -
Lal18g0302 618 Pfam Protein kinase domain 146 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0302 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Lal18g0302 618 PANTHER CDPK-RELATED KINASE 3 51 611 - -
Lal18g0302 618 Gene3D - 417 608 - -
Lal18g0302 618 ProSiteProfiles Protein kinase domain profile. 146 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0302 Lal-Chr18 2487802 2494463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0302 1 612 EF-hand Containing Proteins AT3G50530 55.224 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal18g0302 Pkinase 5.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0302 - - gmx:100796256 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0302 18 2487802 2494463 Lal18g0302 18 2487802 2494463 ECH