Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0273 ATGGGACACAGCGAGGAAGAGAAATCTACAAAGACCGAAAAGCCTCCTTCGCCCGTGACAACGGATCAGACCAACCAGACCAATAGTCATGTCTACCCTGATTGGGCAGCTATGCAGGCATATTATGGACCAAGAGTTGCTGTTCCACCATACTACAACTCAGCAATGGCTTCTGGCCACACTCCTCACCCATATATGTGGGGGCCACCGCAGCCTATGATGCCACCTTATGGGCCGCCATATGCAGCAATTTATCCACATGGAGGGGTTTATGCTCATACCGGAGTTCCTATTGGGCTACCTCCACACGGTCAAGGAGTTCCAACTTCACCTGCTGCTGGGCTCCCTTTAAGCATTGAGACACCACTGAAATCATCTGGAAATGCTGATCACGGTTTAATGAAGAAACTGAAAGGGTTCGATGTGCTTGCAATGTCAATAGGCAATGGCTATGCTGAAAGTGCAGAGCATGGATCGGAAAACAGGCTGTTACAGAGCGGGGACACTGTGGATTCCAGCTATGGAAGTGACGGCAACACTTCAGGGGCTAATCAAACAAGAAGCAAAAGAAGCCGTGAGGGAACACCAACCACTGATGAAGACGGAAAAACTGAGATACATGTTAGTCCAGCTTCCAAAGTGGCTTTAGCTGCTAGTAAGATGATGTCGGTTGTGCCTGCCAATATTGTGGGAAAACCTGTAGTGGATCTGACCAACCATTCTGGTGTTGGAATAAATTCCACAAGTGCTCCACGACCTTGTGCGGTATTGCCTACTGAAGGTTGGGTACAGAATGAGCGCGAGCTGAAACGTGAGAGGAGGAAACAATCAAACCGAGAATCTGCTAGAAGGTCCAGACTAAGGAAGCAGGCCGAGTCTGAAGAACTGGCACAAAAAGTTGATGCCTTGAACGCTGAGAATGCGACACTGAAATCAGAAATGAATAAATTGGCTGAAAGTTCTGAAAAACTGAGGGTTGAGAATGCTATTCTGAAGGAAAAACTCAAACATGTTCAACTTGAACAAACAGATGAGATAATGTTGAACAGCATTCACAGCAAGAGTGTAAGTACAGAGAATTTACTATCAAGAGTTAATGACAATTCAGATTCTAATGATAGAATTGATGAGGAAGAGAATGGTTTTTGTGACAAGAAACCTAACAACTCTAATATAAAGCTGCATCAACTATTGGATGCAAGTCCTAGAACTGATGCAGTTGCAGCTGGTTGA 1233 0.4542 MGHSEEEKSTKTEKPPSPVTTDQTNQTNSHVYPDWAAMQAYYGPRVAVPPYYNSAMASGHTPHPYMWGPPQPMMPPYGPPYAAIYPHGGVYAHTGVPIGLPPHGQGVPTSPAAGLPLSIETPLKSSGNADHGLMKKLKGFDVLAMSIGNGYAESAEHGSENRLLQSGDTVDSSYGSDGNTSGANQTRSKRSREGTPTTDEDGKTEIHVSPASKVALAASKMMSVVPANIVGKPVVDLTNHSGVGINSTSAPRPCAVLPTEGWVQNERELKRERRKQSNRESARRSRLRKQAESEELAQKVDALNAENATLKSEMNKLAESSEKLRVENAILKEKLKHVQLEQTDEIMLNSIHSKSVSTENLLSRVNDNSDSNDRIDEEENGFCDKKPNNSNIKLHQLLDASPRTDAVAAG 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0273 410 SMART brlzneu 266 330 IPR004827 GO:0003700|GO:0006355
Lal18g0273 410 Pfam G-box binding protein MFMR 1 97 IPR012900 -
Lal18g0273 410 MobiDBLite consensus disorder prediction 14 31 - -
Lal18g0273 410 MobiDBLite consensus disorder prediction 267 294 - -
Lal18g0273 410 MobiDBLite consensus disorder prediction 192 207 - -
Lal18g0273 410 Pfam bZIP transcription factor 266 328 IPR004827 GO:0003700|GO:0006355
Lal18g0273 410 MobiDBLite consensus disorder prediction 362 410 - -
Lal18g0273 410 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 268 331 IPR004827 GO:0003700|GO:0006355
Lal18g0273 410 Gene3D - 269 324 - -
Lal18g0273 410 Pfam Disordered region downstream of MFMR 130 230 - -
Lal18g0273 410 SUPERFAMILY Leucine zipper domain 269 324 IPR046347 GO:0003700|GO:0006355
Lal18g0273 410 MobiDBLite consensus disorder prediction 154 207 - -
Lal18g0273 410 MobiDBLite consensus disorder prediction 1 31 - -
Lal18g0273 410 CDD bZIP_plant_GBF1 271 319 IPR045314 GO:0003700|GO:0006355
Lal18g0273 410 Coils Coil 286 341 - -
Lal18g0273 410 MobiDBLite consensus disorder prediction 369 384 - -
Lal18g0273 410 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 410 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lal18g0273 410 PANTHER G-BOX-BINDING FACTOR 3 1 410 - -
Lal18g0273 410 MobiDBLite consensus disorder prediction 159 191 - -
Lal18g0273 410 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 273 288 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0273 Lal-Chr18 2239828 2245476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0273 1 410 bZIP Transcription Factor Family AT2G46270 53.606 1.34e-114 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal18g0273 MFMR_assoc 2.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0273 K09060 - gmx:100781875 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0669 6 4398563 4403827 Lal18g0273 18 2239828 2245476 LSH
Lal22g0604 22 4246271 4252310 Lal18g0273 18 2239828 2245476 LSH