Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0240 ATGTGTGAAGCTCTCAAGAATAGCTACGAATTATTTGAAGAAATAGGTCGTGGCAAATTCGGCACCGTGTTCCGCTGCTACAACCCAACCACAAAGAAATCCCACGCCGCAAAAATCATCCACAAACACCTTCTCACGGATTCAACCGATCGCATGTGCCTAGAAAACGAATCAAAATTCATGACATATCTTTCTCCACACCCAAACATTCTTCAAATTAGCGACGTTTTTGAAGACAACGAATCCTTATCGATTGTCTCAGAACTTTGCCAACCCAATTTCACCCTCTTGGATCGCATCACAAATCACCCCTTATCCGATCTAGAAGCCGCATCAATGATGAAAAACCTTCTAGAAGCAGTTTCATATTGCCACAAACTTGGAATATCACATAGGGACATAAAACCAGAAAACATTTTATTTGATTCGTGGGGAAACCTTAAAGTTTGTGACTTTGGTTCAGCTGAGTGGTTTAGCGACGGAAGAAAGATGAAAGGAATCGTGGGTACACCTTGTTATGTAGCACCTGAAGTATTGTTAGGAAGAGAATATAATGAAAAGGTTGATATTTGGAGTAGTGGTGTGATTATGTATATGATGTTGAGTGGGATTCCACCTTTTTATGGTGATTCTGCTGTACAAATTTTTGAGGCTGTTATTAGAGGGAATCTTAGGTTTCCTACTCAGATTTTTAAGAATGTTTCTTCTTCTGCTAAGGATCTTATGAGGAAAATGATTTGTAGGGATCCCTCTAGAAGAATCTCTGCTGAAGATGCATTGAGACACCCATGGATCTTGAGTGGAGGGTTGACTATGATCTAA 822 0.399 MCEALKNSYELFEEIGRGKFGTVFRCYNPTTKKSHAAKIIHKHLLTDSTDRMCLENESKFMTYLSPHPNILQISDVFEDNESLSIVSELCQPNFTLLDRITNHPLSDLEAASMMKNLLEAVSYCHKLGISHRDIKPENILFDSWGNLKVCDFGSAEWFSDGRKMKGIVGTPCYVAPEVLLGREYNEKVDIWSSGVIMYMMLSGIPPFYGDSAVQIFEAVIRGNLRFPTQIFKNVSSSAKDLMRKMICRDPSRRISAEDALRHPWILSGGLTMI 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0240 273 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2 3 271 - -
Lal18g0240 273 SUPERFAMILY Protein kinase-like (PK-like) 5 267 IPR011009 -
Lal18g0240 273 CDD STKc_CAMK 9 264 - -
Lal18g0240 273 SMART serkin_6 9 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0240 273 ProSiteProfiles Protein kinase domain profile. 9 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0240 273 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Lal18g0240 273 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Lal18g0240 273 Pfam Protein kinase domain 9 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0240 273 PIRSF ILK 3 260 - -
Lal18g0240 273 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 271 - -
Lal18g0240 273 Gene3D Transferase(Phosphotransferase) domain 1 95 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0240 Lal-Chr18 2003360 2005374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0240 3 269 EF-hand Containing Proteins AT1G50700 41.328 2.07e-71 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal18g0240 Pkinase 3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0240 - K08794 gmx:548089 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0240 18 2003360 2005374 Lal18g0240 18 2003360 2005374 ECH