Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0229 ATGCATAATACCATTGCAGATTTGTTGTTATTTTCTCTTGTTTGTATCTCTATCATTTTGTTGAATGCTATTCATGCATCTAGCCAAGTTGCATCATCAGCATCACCATTGATCTTGGGTTGTGGCTTAGACAAAGACGGCGAAAAAGATGCTGATGGAAGAGCATGGGGTTATGATGACAAGTTCCTACAACAAGGTGGAAATTCAATAAAGTCCAAAGCCTTATTCCAAGACCCTTCTCTTTTGGATGTTGTTCCATATATGTCAGCAAGAGTTTTCACATCTGAGACATCATACAAGTTCCCGATCCAACCGGATAAGCGTTATTGGTTAAGGCTCCATTTTTATCCTTCTGTTTATGGCAGTTACAACCCTTCAGAATCATATTTCTCTGTTATAGCAAATGGTGTTACCCTTCTATCAAACTTCAGTGCCTCAATTACTTGTCAAGCCCTCTCACAAGCTTACCTTGATAGAGAATATTCACTTGCGCCTTTGAGCACAGATACTTTGACTATAACCATTAAGCCTAATGATAAGTCTTTTGGTTTCATTAATGGGATTCAACTTATTGAAATGCCTGAGTTGTTTGATTCTAGTGCTGCATTGGTTGGGTATGCTGACCAAACTATTGATGTCAAAAGTTTGCATTTGCAAACAATGTTTAGGCTCAATGTTGGTGGACAATACATATCTCCAAAACAAGATTCTGGTCTTTCTAGGATGTGGTATGATGACACACCTTACATATATGGTGCAGCCACTGGTGTAACTAACCAAGCCGAAAAAGATGTGAAAATCAACTACCAAACCATGCCATCATATGTTGCTCCAACTAATGTCTATGCCACATCAAGATCAATGGGGAATGATAAGAATGTGAATATGGGCTACAATCTCACATGGATTTTCCAAGTTGATCCAAATTCTATGTATCTTGCAAGGTTGCATTTTTGTGATTACTATTATTCTAGAGTGAATGAGATTGCTTTCAATATCTTCCTTAACAACCAGACAGCACAAGAGCAAGCTGATGTGATAGGATGGACAGGAGGTAAAGGTGTTCCAACTTACAAAGACTATGTGATATATGTGCAAGATGATGCAGGTGAAGATCAACTATGGCTTGCTATGCATCCGGCACCGGATTCAAAGCCAGAGTTTTATGATGCCTTGCTTAATGGAGTGGAGATATTCAAGGTCAATGACACAAACTTGTCTGGCCCTAATCCTCAGCCTTCCGATATGCTCATAAAGTACGAAGCAGAGGAAAAAAAGTTCGAAACCAACAAAGGGTATAGTAAGACTGTTGTTGGTAGTGCTGCTGGAGGTGCTGCTGGTTTTGCCTTGGTAGCTGCAATATTATGTGTTGCTGTGTACAACAAGAAGAAGCGAGTTCCCGGATCATACACTCACACAAGCTGGTTGCCAATCTACGGAACCTCACAAACAACCGGAACCAAATCCACGATGTCTGGGAGGAGCACTCATAGTGCCAACTTAAGTGCCATGACTCAAGGTCTTTGTAGATATTTCTCCTTGCAAGAGGTGAAGCAAGCAACAAAGAATTTTGATGAGTCCAATGTTATTGGAGTTGGAGGATTTGGAAAGGTTTACAAGGGTGTTATTGATAATGGGGTTAAAGTGGCAATCAAAAGGTCCAATCCACAATCAGAACAAGGAGTTAATGAATTCCAGACTGAGATTGAAATGCTTTCCAAGTTGAGGCACAAGCATTTGGTGTCATTGATTGGATTTTGTGAGGAAGATGAAGAGATGTGTTTGGTTTATGACTACATGGAACGCGGCACCTTTAGGGAACATTTGTATAAAGGTAGCAAACCTTTGTGTACTCTATCATGGAAGGAAAGATTGGAGATATGCATTGGAGCTGCAAGAGGGCTTCACTACCTTCACACTGGGGCTAAGTATACCATCATTCATAGAGATGTCAAAACAACAAACATTCTCATTGATGAGAACTGGTATGCTAAGGTTTCAGATTTCGGCTTGTCAAAAACCGGTCCGAACATGAACCAAGGCCATGTTAGTACTGTGGTGAAGGGTAGTTTTGGATACTTGGATCCGGAGTATTTCAGGAGGCAACAATTGACTGAGAAATCTGATGTATACTCATTTGGTGTGGTCTTGTTTGAAGCACTGTGTGCAAGGCCTGCTTTGAATCCTAGCCTTTCAAAGGAACAGGTTAGTCTTGCAGACTGGGCATTGATATGCAAAAGAAAAGGAACATTGGAGGATATTATTGACCCTCATATCAAGGGAAAGATAAACCCTGAGAGCTTGAAGAAGTTTGCAGATACTGCTGAGAAGTGCTTATCTGATCACGGAGTTGATCGTCCTTCCATGAATGATTTGTTGTGGAATCTTGAGTTTGCTCTCAACCTGCAAGAGAATCCTGATGGTTCGACTCGATCTGCGACACGTGTTGTTGATGAAAGTGAGTTTGAAGATATAAGCTTGGCAAACAATGACATGGCTAACCATTATAAGAACCTGAGCCTTGGAAGTGAGCATGAACTTAGCAGCAGCCAGGAAGATTCAAGTGACAATTCCACTGCTGTGTTCTCACAACTTCTCAATCCATCAGGGAGATAA 2616 0.4083 MHNTIADLLLFSLVCISIILLNAIHASSQVASSASPLILGCGLDKDGEKDADGRAWGYDDKFLQQGGNSIKSKALFQDPSLLDVVPYMSARVFTSETSYKFPIQPDKRYWLRLHFYPSVYGSYNPSESYFSVIANGVTLLSNFSASITCQALSQAYLDREYSLAPLSTDTLTITIKPNDKSFGFINGIQLIEMPELFDSSAALVGYADQTIDVKSLHLQTMFRLNVGGQYISPKQDSGLSRMWYDDTPYIYGAATGVTNQAEKDVKINYQTMPSYVAPTNVYATSRSMGNDKNVNMGYNLTWIFQVDPNSMYLARLHFCDYYYSRVNEIAFNIFLNNQTAQEQADVIGWTGGKGVPTYKDYVIYVQDDAGEDQLWLAMHPAPDSKPEFYDALLNGVEIFKVNDTNLSGPNPQPSDMLIKYEAEEKKFETNKGYSKTVVGSAAGGAAGFALVAAILCVAVYNKKKRVPGSYTHTSWLPIYGTSQTTGTKSTMSGRSTHSANLSAMTQGLCRYFSLQEVKQATKNFDESNVIGVGGFGKVYKGVIDNGVKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDEEMCLVYDYMERGTFREHLYKGSKPLCTLSWKERLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILIDENWYAKVSDFGLSKTGPNMNQGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPSLSKEQVSLADWALICKRKGTLEDIIDPHIKGKINPESLKKFADTAEKCLSDHGVDRPSMNDLLWNLEFALNLQENPDGSTRSATRVVDESEFEDISLANNDMANHYKNLSLGSEHELSSSQEDSSDNSTAVFSQLLNPSGR 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0229 871 Gene3D Phosphorylase Kinase; domain 1 483 599 - -
Lal18g0229 871 PANTHER OS07G0166700 PROTEIN 25 851 IPR045272 GO:0004714|GO:0006468
Lal18g0229 871 Gene3D Transferase(Phosphotransferase) domain 1 600 820 - -
Lal18g0229 871 MobiDBLite consensus disorder prediction 843 871 - -
Lal18g0229 871 CDD STKc_IRAK 530 797 - -
Lal18g0229 871 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Lal18g0229 871 Pfam Malectin-like domain 40 401 IPR024788 -
Lal18g0229 871 Gene3D - 39 194 - -
Lal18g0229 871 Gene3D - 216 402 - -
Lal18g0229 871 SMART serkin_6 524 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0229 871 ProSiteProfiles Protein kinase domain profile. 524 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0229 871 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 25 851 - -
Lal18g0229 871 Pfam Protein kinase domain 525 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0229 871 SUPERFAMILY Protein kinase-like (PK-like) 498 799 IPR011009 -
Lal18g0229 871 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0229 Lal-Chr18 1907078 1909693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0229 32 871 Receptor kinase-like Gene Family AT3G51550 51.539 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal18g0229 Malectin_like 1.5e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0229 - - mtr:MTR_7g115300 1335.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1581 3 21539365 21541905 Lal18g0229 18 1907078 1909693 LSH
Lal18g0229 18 1907078 1909693 Lal13g0710 13 4612978 4615488 PCT
Lal18g0229 18 1907078 1909693 Lal24g0544 24 3833963 3836569 PCT
Lal13g0710 13 4612978 4615488 Lal18g0229 18 1907078 1909693 PCT
Lal24g0544 24 3833963 3836569 Lal18g0229 18 1907078 1909693 PCT