Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0221 ATGTGCCGTTGGATGAAATTATTGGATGACCTGTTACTTGCCAGTGACCTTTTAGAAGTCGGTTTGGTGGGGGATGACTTCTGTACAGAAGTCGGTTTCGGAGAGTGTGACTTCTATAGAGAAGTCGGTTTGGGGAGGGGCGACTACCTAGAGAAGTCGGTTTGGCAGTGTGTGACTTCTCTTGAGAAGTCGGTTTGGCGAGACTTTAGATACATATACAAAACAACACTGCAGAGACTTTGGATGGAAGAAGAAATGAACTTGAATCAAGAAATACCAGAGGCTGTAGATGAAATTGATGTTAGTGAAGATGAAAATATTAATGAAGTAGAGGAGTTTGATTTTGAAGAAATTGACTTTGGATCATTAAACGAAGATGAAGTAAAGAAATATAGAGAGGGATTTAGGGATAAGAAAAATGAATTAGTTCGAAAAAGGGCTCCAAGAAAAGAAACGAGATGTGGTTGTTTAGCAAGAATGAAAATTCACATTGACAAGGAGAAAGGTGATTGCGTCAAACCGAAGTATGACAGAAACAGACATCGCTTTGATGAAACGAGATGTGGTTGTTTAGCAAGAATGAAAATTCACATTGACAAGGAGAAATGTGATTGGTATGTCAGTTTTTTTGTTGATGATCATAATCATGAATTGGTTGGCGAACATTATGGTGGGATGATAGCGTCAAACCGAAGTATGACAGAAACAGACATCGCTTTGATGAACACAATGAGAGAAGTCGGAATTGCAACAGGCAAAATTTTTGGTTCATTCGCCGGTCAATCTGGTGGATATCGGTATATTGGATTCTCTAAGAAAGATATGTATAATCAAATTCAGAGACAAAGAATAATAAGAAATGGTGACGCAGAATCAGCATTACAATACTTGAAGGAACAATCAAAATCAGATTCTGCAATGTACTGGAGACATAGTGTAGATGAAGAAGGTAAGTTGCAACAATTATTTTGGGCGGATGGATGCAGCATTTTTGACTACTCAATTTTTGGAGATGTTCTAGATTTTGATGCAACCTATGGTCGAAACAAGTACAAGTTTCCGATGGTCATTTTTTCTGGTGTGAACCATCACAAGCAAACAACAGTATTTGTTGATGGTATTGTGTCCAACGAGACAGAGGAAACGTACGTTTGGCTTTTGGGAAATTTCTTGGAGGCAATGAATGGGAAACATCCAAAGTGTGTTATCACTGATGGTGACTTGTCGATGAAAAATGTAATCAAAAGAATTTTCCCTGCAACTCATCATAGACTATGTGCTTGGCATATATGTAACAATGCTGGGAAAAATATAAAGAAGAATAACTTTCATAAGGACTTCCAGAAAGTTATGTATGTTGATGTTGAGATTGATGATTTTAATATGATGTGGGAGGAACTTATTGCTAAGCATGCACTTCATAATAATATTTGGGCATCTCAGATATTTGATTGCAGAAGTATGTGGGCTAGGTCATACATTCGAGGAAAGTTCTATGCTGGTTTGCATACGACATCATGTTGCGAGGGATTACATTCACAAATGGGGAGATATGTAGAATCTGGGTATAATGTTACTGAATTTTTACATCACTTTCAACGATGTCTAAGTTACATGATGAACAATGAGGTGATGGAAGATTTTAAATCTTCGTATGGTGATGAATTGTTACAAACTCCTTATCATAGTTTAGAGGGTCATGCTGCTTCCATATATACTAGAGTTGTTTTCAAAGAATTCCGTGAAATTTTATTGGAAGCTGCAAAATTAAGGATAATTTCTTCCCAACAAACCTCAAGTCATGTCATATACAAGATTGGGAAGCATTATAATCCGAACAAGAGATGGCATGTATCACATTATGATAATGGTAGTAATGTGGACATCAAATGCTCGTGTAAACGAATGGAATCTTTTGGGATGCCATGCAGTCATAGTGTTTTTGTGTTACTAATTTTGGACATATCACAATTGTCATCTTGTTTGGTTCTGGAAAGGTGGACAAAGAAAGCAAAAAATGTTGAAGGTGTTAATTTTCAACAATGCGAGTTAAGCAGAGAATCGGTTAAAACCAGTAGATATAGAGCTTTGAGTGATGCTTGTAGGGTGTTATGTAACCTTGCTTGCGAAACGGAGGAAGACTTTTCAGAGATGCTGGAAAAAGTTTATAACGAACGTGGTAGACTCCGTTCAAAACAACACTCTAGTTCGATGGAAAATGTTGACAATGCCAATGTAGATCAAGTAAGAGACCCAGTTCGAGTGCGTGCTAAAGGGAGAGTACCGGGGATTACCTCAAGGTCCAAGCGAGGTAATCAATGTGGTATATGTCGAGAAATTGGGCACAATAAGGCAAGTTGTCCAAATATTGTTGGTAGTTGTAGTCGTACTTTTGATAATGATTTCAATGAAGAATGA 2418 0.3751 MCRWMKLLDDLLLASDLLEVGLVGDDFCTEVGFGECDFYREVGLGRGDYLEKSVWQCVTSLEKSVWRDFRYIYKTTLQRLWMEEEMNLNQEIPEAVDEIDVSEDENINEVEEFDFEEIDFGSLNEDEVKKYREGFRDKKNELVRKRAPRKETRCGCLARMKIHIDKEKGDCVKPKYDRNRHRFDETRCGCLARMKIHIDKEKCDWYVSFFVDDHNHELVGEHYGGMIASNRSMTETDIALMNTMREVGIATGKIFGSFAGQSGGYRYIGFSKKDMYNQIQRQRIIRNGDAESALQYLKEQSKSDSAMYWRHSVDEEGKLQQLFWADGCSIFDYSIFGDVLDFDATYGRNKYKFPMVIFSGVNHHKQTTVFVDGIVSNETEETYVWLLGNFLEAMNGKHPKCVITDGDLSMKNVIKRIFPATHHRLCAWHICNNAGKNIKKNNFHKDFQKVMYVDVEIDDFNMMWEELIAKHALHNNIWASQIFDCRSMWARSYIRGKFYAGLHTTSCCEGLHSQMGRYVESGYNVTEFLHHFQRCLSYMMNNEVMEDFKSSYGDELLQTPYHSLEGHAASIYTRVVFKEFREILLEAAKLRIISSQQTSSHVIYKIGKHYNPNKRWHVSHYDNGSNVDIKCSCKRMESFGMPCSHSVFVLLILDISQLSSCLVLERWTKKAKNVEGVNFQQCELSRESVKTSRYRALSDACRVLCNLACETEEDFSEMLEKVYNERGRLRSKQHSSSMENVDNANVDQVRDPVRVRAKGRVPGITSRSKRGNQCGICREIGHNKASCPNIVGSCSRTFDNDFNEE 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0221 805 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 186 756 IPR031052 GO:0006355
Lal18g0221 805 Pfam MULE transposase domain 339 433 IPR018289 -
Lal18g0221 805 ProSiteProfiles Zinc finger SWIM-type profile. 616 654 IPR007527 GO:0008270
Lal18g0221 805 PANTHER OS02G0262500 PROTEIN 186 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0221 Lal-Chr18 1834305 1837194 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal18g0221 MULE 3.9e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0221 - - lang:109350553 627.091