Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0219 ATGACAGTTTCACTGTGGAGATCTCGCGCAGCTTCGTCACCGCTTTCAAACCTCAACAGCTTCTTCTCCAATGCCATACGACGCCGTTTCTCCTCTTCCAATTTTGCAAACACAAACCCTCATAATCCACGTGAGAGTATCATGAATCAAATGATGTATTCTGACATCAATTCACAGATTGGGAGCTCCATGCCACTCTCTTCAATGCGAATTGGAACAATCATTCACAACATTGAGTTGAACCAAGGGCAAGGTGGCAAGCTTGTCCGAGCAGCTGGAACTAATGCAAAGATCTTAAAGGACCCCACAGCAGCATACTGTTTAATCCAACTCCCCTCAGGTGTTAAAAAGTTGATTGATTCTCGATGCAGGGCCACCATTGGTACAGTGTCCAATCCAAGCCATGGAGATCGAAAGCTTAGGAAGGCTGGACATAGCCGATGGCTTGGTCGAAGACCGGTTGTGAGAGGAGTGGCCATGAATCCTGTAGATCATCCCCACGGTGGAGGAGAGGGTAAGAGCAAAAGTAGTGGGAAATTTGGGAAAGGATCCCGTACTCCTTGGGGCAAGCCAACTAAGGGTGGCTACAAGACTGGACCGCTAAAGCGCAGAAGGTAA 618 0.4806 MTVSLWRSRAASSPLSNLNSFFSNAIRRRFSSSNFANTNPHNPRESIMNQMMYSDINSQIGSSMPLSSMRIGTIIHNIELNQGQGGKLVRAAGTNAKILKDPTAAYCLIQLPSGVKKLIDSRCRATIGTVSNPSHGDRKLRKAGHSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGKFGKGSRTPWGKPTKGGYKTGPLKRRR 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0219 205 Gene3D Ribosomal protein L2, domain 3 131 205 IPR014726 -
Lal18g0219 205 MobiDBLite consensus disorder prediction 159 205 - -
Lal18g0219 205 ProSitePatterns Ribosomal protein L2 signature. 153 164 IPR022671 GO:0003735|GO:0005840|GO:0006412
Lal18g0219 205 PANTHER RIBOSOMAL PROTEIN L2 47 205 IPR002171 GO:0003735|GO:0005840|GO:0006412
Lal18g0219 205 Pfam Ribosomal Proteins L2, C-terminal domain 60 189 IPR022669 GO:0003735|GO:0005840|GO:0006412
Lal18g0219 205 SUPERFAMILY Translation proteins SH3-like domain 60 195 IPR008991 -
Lal18g0219 205 Gene3D - 54 130 IPR014722 -
Lal18g0219 205 PANTHER 39S RIBOSOMAL PROTEIN L2, MITOCHONDRIAL 47 205 - -
Lal18g0219 205 SMART Ribosomal_L2_C_2 58 191 IPR022669 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0219 Lal-Chr18 1806460 1809279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0219 50 170 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 42.636 2.35e-24 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0219 - - lang:109347761 336.265