Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0193 ATGAAGAAAGAAAACAGTGTTGTGCTGAAACCTGCAGAGTTCCCTGGTCGAATGATTCGTGCTCAGGTTGCTTCTTCTCGTGTTTCTAGACAGCTTGTGCCTTTGAAGGAGCCATCACGACGAAATCAGAACCAACCACTATGTGCCAATCCCAAAAGAGCAGTTTCTGATACTGGTAGTACATGTCTTCAACATAAAAAGAGGGTTGTTCTTCAGGATGTTACCAATGTTCGCTGTCAAAATTCATACAAAAGCAGTTTCGATTCGACGATAATTCAGGCTAAGAAAAGAAAGGTGGTTAAGTCTAGTCGAATTAATGTTGCTAAAGTGGCTCCTTCTGTTGCTGTGGAGATACCACAACTTCAATCCAAATCAGAAGATGCTATCTGTTCAACTAATTTGGATAACAATTCCCTTCTAAAGATGAACTCCAATAAGTGTGGCAAAGATGATAGTACTTCTGGAACATCTGCTCAGCATATAGATTCTAAGAAAAAAGCGAAGAAAGGCAACTTTTATGAACTTTTGATAGCATCAAAGGGTCCAGTCATCACTGACATTGATGATAATTTTGAAGATCCTCAACTATGCAGCCTCTATGTCACCGATATCTATAACAACCTGCGCGTTGCCGAGCTTGCAAGAAGGCCACATCCTAATTCCATGGAAACAGTGCAGCAAGATATCACTCAAGGCATGCGTGGTATACTGGTTGATTGGCTTGTGGAGGTTTCTGAGGAATACAAATTGGGACAAGACACTCTTTACCTCACTGCATATCTCATAGATTGGTTTCTCTCCAAAAGTTATGTTGAAAGACAAAGACTTCAGCTGCTCGGAATCACATGCATGCTCATTGCATCGAAGTACGAAGAGATTAATGCTCCTCATATTGAAGATTTCTGCTTCATCACAGACAACACATACACAAAAACTGAGGTACTAAGAATGGAGAGTCAAGTGTTAAAGTTGTCTGAATATAAACTGTTTACTCCCACTACAATAACTTTCCTCAGGAGATTTCTTCACGCAGCACAAGCGTCTTACAAGAGTCCTAGCCTTGAATTGGAGTACCTAGCCAGTTACTTAGCTGAACTGACACTGATGGACTATGATTTCTTGAATTTCCTTCCTTCTATAATTGCTGCATCAGTTGTATTTCTTGCTAAATGGACATTAGATCAGTCAAACCACCCATGGAATCCTACTCTTGAACACTATGCATATTATAAAGCATCAGACTTGAAAACCACTGTTTTTGCATTGCAAGACCTACAGCTGAATACCAATGGATGCCCTCTAAATGCTGTCCGCTCAAAGTACAGACAAGAAAAGTTTAAATGTGTAGCGGATTTGTCTTCACCAAAACTAATAGAAAGTTTGTTCTGA 1389 0.3996 MKKENSVVLKPAEFPGRMIRAQVASSRVSRQLVPLKEPSRRNQNQPLCANPKRAVSDTGSTCLQHKKRVVLQDVTNVRCQNSYKSSFDSTIIQAKKRKVVKSSRINVAKVAPSVAVEIPQLQSKSEDAICSTNLDNNSLLKMNSNKCGKDDSTSGTSAQHIDSKKKAKKGNFYELLIASKGPVITDIDDNFEDPQLCSLYVTDIYNNLRVAELARRPHPNSMETVQQDITQGMRGILVDWLVEVSEEYKLGQDTLYLTAYLIDWFLSKSYVERQRLQLLGITCMLIASKYEEINAPHIEDFCFITDNTYTKTEVLRMESQVLKLSEYKLFTPTTITFLRRFLHAAQASYKSPSLELEYLASYLAELTLMDYDFLNFLPSIIAASVVFLAKWTLDQSNHPWNPTLEHYAYYKASDLKTTVFALQDLQLNTNGCPLNAVRSKYRQEKFKCVADLSSPKLIESLF 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0193 462 PANTHER CYCLIN-A2-4 47 462 - -
Lal18g0193 462 PANTHER CYCLINS 47 462 IPR039361 -
Lal18g0193 462 SMART Cyclin_C_2 332 455 IPR004367 -
Lal18g0193 462 SUPERFAMILY Cyclin-like 332 457 IPR036915 -
Lal18g0193 462 SMART cyclin_7 239 323 IPR013763 -
Lal18g0193 462 SMART cyclin_7 336 424 IPR013763 -
Lal18g0193 462 MobiDBLite consensus disorder prediction 35 56 - -
Lal18g0193 462 Pfam Cyclin, C-terminal domain 332 454 IPR004367 -
Lal18g0193 462 SUPERFAMILY Cyclin-like 192 326 IPR036915 -
Lal18g0193 462 Pfam Cyclin, N-terminal domain 203 328 IPR006671 -
Lal18g0193 462 PIRSF Cyclin_A_B_D_E 17 461 IPR039361 -
Lal18g0193 462 Gene3D - 217 330 - -
Lal18g0193 462 CDD CYCLIN 332 422 IPR013763 -
Lal18g0193 462 CDD CYCLIN 233 322 IPR013763 -
Lal18g0193 462 MobiDBLite consensus disorder prediction 36 56 - -
Lal18g0193 462 Gene3D - 203 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0193 Lal-Chr18 1590132 1596866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0193 1 462 Core Cell Cycle Gene Families AT1G80370 53.548 6.95e-161 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0193 K06627 - gmx:100793657 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0193 18 1590132 1596866 Lal18g0193 18 1590132 1596866 ECH
Lal1g1271 1 14081618 14091637 Lal18g0193 18 1590132 1596866 LSH