Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0190 ATGGTTTTGAACTCCAATAGAGTTGATAACTTTGTTTGTAATGGAACCACAACCACTATCAAAATCCAAACAGATATACAAATGCAACAAACAGTACCATTGGAAATACATAAGGTTAGGTTGCCACCACAACACACAACATTACACAAACTCAAACATAGACTCTCTGAGATTTTCTTCCCTGATGACCCTTTATACACCTTCAAAAACCAAACTTGGTGCACCAAGTTCTTTTTTGCTATTCAATACTTGTTCACCATTTTTCAATGGGTTCCTCACTACAATCTTTTCCTTCTTCGCCATGATATTATCTCTGGTCTCACCATTGCTAGCCTTGCCATTCCTCAGGGAATCAGTTATGCTAAGCTTGCAAACTTGCCACCTATTATTGGATTATATTCCAGTTTTGTGCCACCATTGATATATTCCTTGTTAGGAAGTTCTAGACATCTTGGAGTTGGTCCTGTTTCAATTGCATCATTGGTGATGGGATCAATGTTAAGTGAGACAGTTTCTTATACTCAAGATCCAATTCTCTATCTTAAGTTAGCTCTCACTGCCACTTTCTTTGCTGGTGTATTCCAATCTTCTTTGGGTTTCTTAAGACTTGGCTTTGTTATTGATTTTCTGTCAAAGGCAACATTGGTGGGTTTCATGGCTGGTGCAGCCATTATTGTATCACTTCAACAGCTCAAAGGTTTATTTGGAATAGTGCATTTCACCAGCAAGATGCAAATAATACCTGTACTTGCCTCTGTGTTCATGCAAAGAGATGAGTGGTCATGGCAAACCATTCTAATTGGATTTAGCTTCCTAGCCTTTCTCCTAACAGCAAGGCACATTAGCTTGAGGAAACCAAACTTATTCTGGGTTTCAGCAGCTGCACCATTGACATCAGTTATTCTGTCAACAATTTTAGTCTTTCTACTGAGAAATAAGGTTCACAAAATTGCAATTATTGGTGAATTGCCAAAGGGTGTTAATCCACCATCATCAAACATGCTATACTTCAGTGGTCCTTATTTGGCTCTTGCTATCAAAACTGGACTTGTCACTGGAATCTTATCTCTCACTGAAGGAATTGCAGTGGGAAGAACATTTGCTACAATTAAGAACTACCAAGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTTATGAACATTGCTGGATCGTTTTCTCGATCAGCCGTTAACTACAATGCAGGAGCACAGACAACAGTCTCTAATATAATCATGGCTTCAGCAGTGCTTGTGACCCTTTTGTTTCTCATGCCTCTATTCTATTACACACCAAATCTTGTCTTAGCATCCATTATCATCACTGCTGTGATTGGTTTAATAGATTATCAAGCTGCATATAAACTGTGGAAGGTTGACAAGCTTGATTGCTTGGCCTGCTTGTGCTCCTTTTTCGGTGTTCTATTCATTTCAGTGCCTTTAGGCCTAGGAATAGCAGTAGCGATATCAGTCATCAAGATCCTGCTTCATGTCTCTCGGCCTAACACACGGGTTTTAGGGAATATACCAGGGACGTTGATATTCCGCAACGTAAACCAATATAGAGAAGCTCTAAGAATTCCTTCATTTCTCATTTTGGCTGTTGAGTCTCCCATCTACTTTGCTAACTCAACTTACCTGCAAGAAAGGATTTTGAGATGGGTTCGAGAAGAGGAAGAGCGTATAGAAGCAAACAAGGAAAATACATTGAAGTGCATAATTTTAGACATGACAGCTGTCACAGCCATAGACACAAATGGGATGGACACTGTAAGTGAACTTAGAAAGATTTTGGAAAAAAGATCACTTCAGTTTGTGTTAGCAAATCCTGTGGGAAATGTGATGGAAAAGTTACATCAAGCAAATATTTTGGATTCCTTTGGGTTGAAAGGAGTTTATCTTACAGTAGCAGAAGCTGTGGCTGACATTTCATCTTCCTTTAAACCACAACCTTGA 1956 0.3916 MVLNSNRVDNFVCNGTTTTIKIQTDIQMQQTVPLEIHKVRLPPQHTTLHKLKHRLSEIFFPDDPLYTFKNQTWCTKFFFAIQYLFTIFQWVPHYNLFLLRHDIISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSETVSYTQDPILYLKLALTATFFAGVFQSSLGFLRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLFGIVHFTSKMQIIPVLASVFMQRDEWSWQTILIGFSFLAFLLTARHISLRKPNLFWVSAAAPLTSVILSTILVFLLRNKVHKIAIIGELPKGVNPPSSNMLYFSGPYLALAIKTGLVTGILSLTEGIAVGRTFATIKNYQVDGNKEMMAIGLMNIAGSFSRSAVNYNAGAQTTVSNIIMASAVLVTLLFLMPLFYYTPNLVLASIIITAVIGLIDYQAAYKLWKVDKLDCLACLCSFFGVLFISVPLGLGIAVAISVIKILLHVSRPNTRVLGNIPGTLIFRNVNQYREALRIPSFLILAVESPIYFANSTYLQERILRWVREEEERIEANKENTLKCIILDMTAVTAIDTNGMDTVSELRKILEKRSLQFVLANPVGNVMEKLHQANILDSFGLKGVYLTVAEAVADISSSFKPQP 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0190 651 ProSiteProfiles STAS domain profile. 520 643 IPR002645 -
Lal18g0190 651 Gene3D STAS domain 500 645 IPR036513 -
Lal18g0190 651 PANTHER SLC26A/SULP TRANSPORTER-RELATED 24 651 - -
Lal18g0190 651 Pfam STAS domain 521 639 IPR002645 -
Lal18g0190 651 CDD STAS_SulP_like_sulfate_transporter 521 636 - -
Lal18g0190 651 PANTHER SULFATE TRANSPORTER 24 651 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal18g0190 651 SUPERFAMILY SpoIIaa-like 525 642 IPR036513 -
Lal18g0190 651 Pfam Sulfate permease family 99 468 IPR011547 GO:0016021
Lal18g0190 651 ProSitePatterns SLC26A transporters signature. 128 149 IPR018045 GO:0008271|GO:0008272
Lal18g0190 651 TIGRFAM sulP: sulfate permease 87 639 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0190 Lal-Chr18 1560631 1565544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0190 4 648 Inorganic Solute Cotransporters AT3G15990 71.689 0.0 963
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0190 K17471 - gmx:100817604 1052.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0190 18 1560631 1565544 Lal18g0190 18 1560631 1565544 ECH
Lal1g1274 1 14124886 14132018 Lal18g0190 18 1560631 1565544 LSH
Lal10g1142 10 18132022 18137035 Lal18g0190 18 1560631 1565544 PCT
Lal8g0234 8 1585033 1590934 Lal18g0190 18 1560631 1565544 PCT
Lal18g0190 18 1560631 1565544 Lal10g1142 10 18132022 18137035 PCT
Lal18g0190 18 1560631 1565544 Lal8g0234 8 1585033 1590934 PCT