Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal18g0188 | ATGAGTGTGGTCGGTTTTGATTTCGGCAATGAAAGCTGCATTGTTGCGGTTGCAAGGCAGAGGGGGATTGATGTTGTGCTCAATGATGAGTCCAAGCGTGAAACACCTGCAATTGTATGCTTTGGTGATAAGCAACGCTTCATTGGCACTGCTGGGGCTGCATCCACTATGATGAACCCCAATAACTCCATCTCACAGATTAAGAGGCTAATTGGTAAACAATTTTCTGATACCGAATTGCAGCGGGATATCAAGTCATTGCCCTTTCATGTCACCGAAGGCCCTGATGGATATCCTTTGATTCATGCGCGCTACTTGGGTGAAGCTAAAGCATTTACCCCAATCCAAGTCTTTGGAATGATGTTGTCGAATCTTAAAGAAATAGCTGAGAAAAATCTCAATGCCGCTGTTGTTGATTGTTGCATTGGAATCCCAATTTATTTTACTGATCTCGAGAGGAGGGCAGTCTTGGATGCTACCACTATTGCTGGCTTGCACCCACTTCACCTGATTCATGAAACTACTGCGACTGCCTTGGCCTATGGGATTTATAAGACAGATCTTCCTGAAAATGATCCGCTAAATGTTGCCTTTGTTGACATTGGACATGCAAGCATGCAAGTGTGCATTGCTGGATTCAAAAAGGGGCAGCTTAAAATACTAGCTCATTCATATGATAGGTCATTGGGAGGTAGAGATTTTGACGAGGTTTTGTTCCATCATTTTGCTGTGAAATTTAAGGAAGAGTACAAGATTGATGTTTTCCAAAATGCCAGGGCTTCTCTAAGGCTCAGGGCTGCCTGTGAGAAGCTGAAGAAGGTTCTTAGTGCAAATCCCGAGGCACCTCTGAACATTGAATGTTTAATGGATGAGAAGGATGTCAGGAGCTTCATCAAGCGTGATGACTTTGAGCAACTAAGTCTTCCAATTTTGGAACGTGTCAAGGGACCTTTGGAGAAGGCACTTGCTGAAGCAGGCCTTACGGTTGAAAATATACACATGGTTGAGGTGGTTGGTTCTGGTTCTCGTGTACCAGCTATAAACAAAATATTGACAGAGTTTTTCGGAAAGGAGCCTAGGCGAACAATGAATGCTAGTGAGTGTGTTGCTAGGGGTTGTGCCTTACAATGTGCAATCCTTAGTCCAACATTTAAAGTACGAGAGTTTCAGGTGAACGAAAGCTTTCCTTTCTCAATTTCTCTCTCATGGAAAGGTTCTGCTTCAGATGCACAAGATAGTGGACCAGATAGTCAGCTAAGTACCGTTGTTTTCCCCAAGGGAAATTCCATACCAAGTATCAAGGCTCTTACATTTTACAGGTCTGGAACATTTTCTGTGGATGTTCAATATGGTGGTGATGTGAGTGGGCTGCAAACACCGACTAAGATCAGCACATATACCATTGGTCCTTTCCAAAGTTTAAAAAGTGAAAGGGCAAAGATTAAGGTTAAAGTTCGTTTGAATCTGCATGGAATTGTATCCCTTGACTCCGCAATTCTCTTGGAAGAGGAAGAAGTTGAAGTTCCAGTTTCCAAAGAATCAGCAGTAGAAAATACCAAGATGGACACTGATGAAGCTCCTGCCAATGCTGCTCCTCCTCCAACCTCTAATGATAGTGATGTTAATATGCAAGATGCAAAGGCTAGTGCTGACACACCCGGGGTTGAAAATGTTACCTCTCAAACGGATTCTGAGACCAAGGTTCAAGCTCCAAAGAAAAAGGTTAAGAAAACAAACATTCCTGTAGCAGAGTTAGTTTATGGAGCAATGTCACATGTGGATGTCCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGTGTGATGGAAGAAACAAAAGACAAGAAAAATGCTGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACGAAGAGTTTGTGACTGCTCCAGAGAAGGAAGGTTTTATTGCCAAACTTCAGGAGGTAGAAGACTGGCTATATGAGGATGGTGAAGATGAAACTAAAGGTGTATATGTTGCCAAACTTGAAGAACTAAAAAAGCAAGGTGATCCAGTTGAAGAGCGTTATAAAGAATATACGGAGAGAGGTACTGTGATTGATCAGTTCGTTTATTGTATTAATAGTTACAGAGAAGCTGCAGTGTCAAATGATCCCAAATTTGATCACATTGACATCAACGAGAAACAGAAGGTTTTAACTGAATGTGTTGAAGCTGAGAATTGGCTTAGGGAGAAGAAGCAGCAGCAGGACTCACTTCCAAAATATGCCAACCCTGTACTCTTGGTAGCTGAAATAAGAAAGAAAGCTGAGGCTGTTGATAGGTTCTGTAAGCCGATTATGACGAAACCCAAGCCAGCCAAACCAGCTACTCCACCAACACCAGCAACCTCACCACCTCAGGGGGATACCAACAGTAATGAGAATTCCGGGGCCACCGGTAGTGAGGTCCCACCAGAGTCTTCTGAACCAATGGAGACTGATAAGTCAGACAACACAGGTTCTGCATAA | 2511 | 0.4277 | MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPNNSISQIKRLIGKQFSDTELQRDIKSLPFHVTEGPDGYPLIHARYLGEAKAFTPIQVFGMMLSNLKEIAEKNLNAAVVDCCIGIPIYFTDLERRAVLDATTIAGLHPLHLIHETTATALAYGIYKTDLPENDPLNVAFVDIGHASMQVCIAGFKKGQLKILAHSYDRSLGGRDFDEVLFHHFAVKFKEEYKIDVFQNARASLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRSFIKRDDFEQLSLPILERVKGPLEKALAEAGLTVENIHMVEVVGSGSRVPAINKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSASDAQDSGPDSQLSTVVFPKGNSIPSIKALTFYRSGTFSVDVQYGGDVSGLQTPTKISTYTIGPFQSLKSERAKIKVKVRLNLHGIVSLDSAILLEEEEVEVPVSKESAVENTKMDTDEAPANAAPPPTSNDSDVNMQDAKASADTPGVENVTSQTDSETKVQAPKKKVKKTNIPVAELVYGAMSHVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYEEFVTAPEKEGFIAKLQEVEDWLYEDGEDETKGVYVAKLEELKKQGDPVEERYKEYTERGTVIDQFVYCINSYREAAVSNDPKFDHIDINEKQKVLTECVEAENWLREKKQQQDSLPKYANPVLLVAEIRKKAEAVDRFCKPIMTKPKPAKPATPPTPATSPPQGDTNSNENSGATGSEVPPESSEPMETDKSDNTGSA | 836 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal18g0188 | 836 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 387 | 587 | IPR029047 | - | |
Lal18g0188 | 836 | MobiDBLite | consensus disorder prediction | 511 | 572 | - | - | |
Lal18g0188 | 836 | MobiDBLite | consensus disorder prediction | 530 | 546 | - | - | |
Lal18g0188 | 836 | CDD | HSPA4_like_NDB | 2 | 381 | - | - | |
Lal18g0188 | 836 | Gene3D | - | 38 | 113 | - | - | |
Lal18g0188 | 836 | Gene3D | - | 5 | 374 | - | - | |
Lal18g0188 | 836 | MobiDBLite | consensus disorder prediction | 785 | 799 | - | - | |
Lal18g0188 | 836 | PANTHER | HEAT SHOCK 70 KDA PROTEIN 14 | 1 | 835 | - | - | |
Lal18g0188 | 836 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 592 | 690 | IPR029048 | - | |
Lal18g0188 | 836 | Gene3D | - | 186 | 360 | - | - | |
Lal18g0188 | 836 | PRINTS | 70kDa heat shock protein signature | 2 | 15 | - | - | |
Lal18g0188 | 836 | PRINTS | 70kDa heat shock protein signature | 30 | 42 | - | - | |
Lal18g0188 | 836 | PRINTS | 70kDa heat shock protein signature | 140 | 160 | - | - | |
Lal18g0188 | 836 | PRINTS | 70kDa heat shock protein signature | 332 | 348 | - | - | |
Lal18g0188 | 836 | PRINTS | 70kDa heat shock protein signature | 363 | 383 | - | - | |
Lal18g0188 | 836 | SUPERFAMILY | Actin-like ATPase domain | 1 | 185 | IPR043129 | - | |
Lal18g0188 | 836 | MobiDBLite | consensus disorder prediction | 777 | 836 | - | - | |
Lal18g0188 | 836 | Coils | Coil | 676 | 696 | - | - | |
Lal18g0188 | 836 | PANTHER | HSC70CB, ISOFORM G-RELATED | 1 | 835 | - | - | |
Lal18g0188 | 836 | SUPERFAMILY | Actin-like ATPase domain | 195 | 380 | IPR043129 | - | |
Lal18g0188 | 836 | MobiDBLite | consensus disorder prediction | 800 | 817 | - | - | |
Lal18g0188 | 836 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 384 | 623 | IPR029047 | - | |
Lal18g0188 | 836 | Gene3D | Actin; Chain A, domain 4 | 230 | 313 | - | - | |
Lal18g0188 | 836 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 707 | 790 | IPR029048 | - | |
Lal18g0188 | 836 | Pfam | Hsp70 protein | 3 | 691 | IPR013126 | GO:0005524|GO:0140662 | |
Lal18g0188 | 836 | Gene3D | - | 590 | 700 | IPR029048 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal18g0188 | Lal-Chr18 | 1545747 | 1551351 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal18g0188 | 4 | 660 | Calmodulin-binding Proteins | AT3G09440 | 30.618 | 2.11e-86 | 286 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal18g0188 | K09489 | - | gmx:100778196 | 1359.36 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal18g0188 | 18 | 1545747 | 1551351 | Lal18g0188 | 18 | 1545747 | 1551351 | ECH | |
Lal20g1191 | 20 | 16380667 | 16386350 | Lal18g0188 | 18 | 1545747 | 1551351 | LSH | |
Lal1g1277 | 1 | 14145905 | 14152198 | Lal18g0188 | 18 | 1545747 | 1551351 | LSH | |
Lal10g1138 | 10 | 18113611 | 18119072 | Lal18g0188 | 18 | 1545747 | 1551351 | PCT | |
Lal8g0237 | 8 | 1598276 | 1603618 | Lal18g0188 | 18 | 1545747 | 1551351 | PCT | |
Lal18g0188 | 18 | 1545747 | 1551351 | Lal10g1138 | 10 | 18113611 | 18119072 | PCT | |
Lal18g0188 | 18 | 1545747 | 1551351 | Lal8g0237 | 8 | 1598276 | 1603618 | PCT |