Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0182 ATGGATTTTTGGCAAATATTTAATGGAAGTTGGGGTAAGGAATTTGTAGCAGGAGGGTTTGGAGGGATTGCTGCAGTTATATCTGGTCATCCATTAGACACAATAAGGGTCAGGCAACAGAAGTCAACAACTGGTTCTGCCTTTAACATCCTTAGACATATGTTGTTTAAGGAAGGACCATGTTCTCTATACCGTGGCATGGCTTCACCATTGTTTGCCTCTACTCTTCAGAATGCTATGGTTTTCCAATCCTACACAGTTCTGTCAAGGGCATTAGACTCATACATTGCTTCTAAAGACTCTTCTTCCTACAAGGGTGTTATTTTAGGAGGAGTTGGTTCTGGTGCCCTACAAAGTTTTCTGATTTCTCCTGTGGAGTTAGTTAAGATTCAAGTCCAGCTTAGAGGCACTTGTGAGAAAAAGTTGCCACATTCCAAGTCCTCTAATAATGGTCCTATAAGGGTAGTTAAAAATATATGGAAAAATGAGGGAATTGTAGGCATGTATAGAGGACTTTGCATCACTATGATAAGGGATGCACCTTCCCATGGTGTGTACTTTTGGACATATGAATACATGAAAGAACAACTTCACCCGGGTTGCAGAAAAAATTGTGATGAAAGCTTGAATACTATGTTGGTAGCAGGAGGTTTAGCAGGGGTAACAAGTTGGATTTTTTGCTACCCTTTTGATGTTGTAAAGACAAGACTACAGGCACAAACACCGTCTTCGATGAAATACGAAGGCATTTTTGATTGCTTCTTGAAGATCGTTCGAGAAGAAGGGCATTCTGCGCTTTGGCGCGGGGTAGAAACTGCGGTTGCTAGAGCGTTTGTCGTGAATGGTGCTATATTTGCTGCTTATGAGGCTACATTAAGAATTCTGTTTCACAATAATAGAAGTAATCAAATGCAAGACACTATCTAA 927 0.4056 MDFWQIFNGSWGKEFVAGGFGGIAAVISGHPLDTIRVRQQKSTTGSAFNILRHMLFKEGPCSLYRGMASPLFASTLQNAMVFQSYTVLSRALDSYIASKDSSSYKGVILGGVGSGALQSFLISPVELVKIQVQLRGTCEKKLPHSKSSNNGPIRVVKNIWKNEGIVGMYRGLCITMIRDAPSHGVYFWTYEYMKEQLHPGCRKNCDESLNTMLVAGGLAGVTSWIFCYPFDVVKTRLQAQTPSSMKYEGIFDCFLKIVREEGHSALWRGVETAVARAFVVNGAIFAAYEATLRILFHNNRSNQMQDTI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0182 308 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 297 - -
Lal18g0182 308 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 297 - -
Lal18g0182 308 Pfam Mitochondrial carrier protein 212 298 IPR018108 -
Lal18g0182 308 Pfam Mitochondrial carrier protein 108 197 IPR018108 -
Lal18g0182 308 Pfam Mitochondrial carrier protein 10 92 IPR018108 -
Lal18g0182 308 PRINTS Mitochondrial carrier protein signature 106 119 IPR002067 GO:0055085
Lal18g0182 308 PRINTS Mitochondrial carrier protein signature 171 191 IPR002067 GO:0055085
Lal18g0182 308 PRINTS Mitochondrial carrier protein signature 222 240 IPR002067 GO:0055085
Lal18g0182 308 PRINTS Mitochondrial carrier protein signature 267 285 IPR002067 GO:0055085
Lal18g0182 308 Gene3D Mitochondrial carrier domain 10 307 IPR023395 -
Lal18g0182 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 9 91 IPR018108 -
Lal18g0182 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 196 IPR018108 -
Lal18g0182 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 207 294 IPR018108 -
Lal18g0182 308 SUPERFAMILY Mitochondrial carrier 11 289 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0182 Lal-Chr18 1487453 1489448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0182 1 304 Antiporters AT1G79900 60.131 7.17e-123 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0182 K15109 - gmx:100812056 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0182 18 1487453 1489448 Lal18g0182 18 1487453 1489448 ECH