Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal18g0163 | ATGGGAAAAGCTACAAGATGGTTGAAGGGTTTGTTGGGGATGAAGAAGGAGAAGGACCACAATGATCCCAATTTGGTTTTTGATAACAACAAGAAGGAGAAGAGAAGGTGGAGTTTTGCTAAGCAAGGGAAAGATATTGCACTAGGTCCAAATAATGGTGATGTTCAAGTTTCACCTTCTCATAATAGTGCTTGGCTCAGATCCTATATTGCTGAATCTGAGAATGAGCAGAACAAGCATGCAATTGCTGTTGCAGCTGCCACAGCCGCCGCCGCGGACGCTGCTGTGGCCGCGGCACAAGCGGCCGTGGCAGTTGTCAGACTGACAAGCCATGGGAGAGGCACATTGTTCACTGGGAGCAGAGAGAAATGGGCTGCAGTGAAGATCCAAACTTTTTTCAGAGGCTATTTGGCAAGAAAGGCTCTTAGAGCACTGAAAGGATTGGTTAAGATTCAGGCTCTTGTTAAAGGGTATCTAGTTCGGAAAAGGGCTGCTGCAACTCTTCACAGTATGCAAGCTCTAATAAGAGCTCAGGCTGCGGTTCGATCACAGCGAGCTCGTCGTTCCGTGAGCAAAGATAATAGAATTTTACCCGAAGTTCTTGCAAGAAAATCTGTGGAACGATTCGATGAACCAAGGAGTGAATTCCATAGCAAAAGACTACCTGCATCATATGAAACATCATTGAATGGATTTGATGAAAGCCCGAAAATTGTTGAGATTGATACTTACAAGACTAGATCAAGATCTAGGCATTTCACCTCTACAATGTCGGAATATGGAGAAGATATGCCTTGTCATGCAATATCATCTCCACTTCCTAGTCCTGTCCCCGGTAAAATATCAGTTCCTGAATGCAAACATGTTCAAGATTTTGAATGTTACTTCAATGTCGACGAGTGTAGGTTCGCGACAGCTCATAACACGCCTCGTTTCGCAAGTTTTGTGAGGCCGAACACCCCTGCTACACCGGCCAAGAGTGTTTGTGGAGATGCTTACTTTCGACCTTACTGCAATTCTCCTGGTTACATGGCCAATACTCAATCATTTAATGCAAAACTAAGATCTCACAGTGCTCCAAGGCAAAGACCTGAACCTAAGAAAAGGCTTTCACTCAATGAAATGATGGCAGCAAGAAATAGCATTAGTGGTGTTAAAATGCAAAGGCCATCAGATTTTCAGGCTCAAGAATCATGGAATTTATGA | 1206 | 0.4403 | MGKATRWLKGLLGMKKEKDHNDPNLVFDNNKKEKRRWSFAKQGKDIALGPNNGDVQVSPSHNSAWLRSYIAESENEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTLFTGSREKWAAVKIQTFFRGYLARKALRALKGLVKIQALVKGYLVRKRAAATLHSMQALIRAQAAVRSQRARRSVSKDNRILPEVLARKSVERFDEPRSEFHSKRLPASYETSLNGFDESPKIVEIDTYKTRSRSRHFTSTMSEYGEDMPCHAISSPLPSPVPGKISVPECKHVQDFECYFNVDECRFATAHNTPRFASFVRPNTPATPAKSVCGDAYFRPYCNSPGYMANTQSFNAKLRSHSAPRQRPEPKKRLSLNEMMAARNSISGVKMQRPSDFQAQESWNL | 401 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal18g0163 | 401 | SMART | iq_5 | 121 | 143 | IPR000048 | GO:0005515 | |
Lal18g0163 | 401 | SMART | iq_5 | 144 | 165 | IPR000048 | GO:0005515 | |
Lal18g0163 | 401 | PANTHER | PROTEIN IQ-DOMAIN 14-LIKE | 1 | 393 | - | - | |
Lal18g0163 | 401 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 393 | - | - | |
Lal18g0163 | 401 | ProSiteProfiles | IQ motif profile. | 122 | 150 | IPR000048 | GO:0005515 | |
Lal18g0163 | 401 | ProSiteProfiles | IQ motif profile. | 146 | 173 | IPR000048 | GO:0005515 | |
Lal18g0163 | 401 | Gene3D | - | 64 | 148 | - | - | |
Lal18g0163 | 401 | ProSiteProfiles | IQ motif profile. | 170 | 199 | IPR000048 | GO:0005515 | |
Lal18g0163 | 401 | Pfam | IQ calmodulin-binding motif | 124 | 143 | IPR000048 | GO:0005515 | |
Lal18g0163 | 401 | Pfam | IQ calmodulin-binding motif | 149 | 163 | IPR000048 | GO:0005515 | |
Lal18g0163 | 401 | Pfam | Protein of unknown function (DUF4005) | 319 | 383 | IPR025064 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal18g0163 | Lal-Chr18 | 1318471 | 1321729 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal18g0163 | 1 | 387 | IQD Protein Family | AT3G16490 | 53.941 | 6.83e-108 | 321 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal18g0163 | - | - | gmx:100797686 | 600.512 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal18g0163 | 18 | 1318471 | 1321729 | Lal18g0163 | 18 | 1318471 | 1321729 | ECH | |
Lal1g1337 | 1 | 15133165 | 15136619 | Lal18g0163 | 18 | 1318471 | 1321729 | LSH | |
Lal8g0269 | 8 | 1808852 | 1815200 | Lal18g0163 | 18 | 1318471 | 1321729 | PCT | |
Lal18g0163 | 18 | 1318471 | 1321729 | Lal8g0269 | 8 | 1808852 | 1815200 | PCT |