Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0144 ATGAACTATAACAACAACAACAATCCAAGAAATGGTAACAATACAACCCAGGCTTGCGCCGCGTGCAAGTACCAACGAAGGAAGTGCGCGCCCGACTGCATTCTTGCACCTTATTTCCCTCATGATCGCCAAAGGCAATTCCTTAATGCCCATAAATTATTTGGTGTTAGCAACATTACCAAGATTATCAAGTTTCTTGCGCCGCAAGAAAAGGATCAAGCGATGCGCACAATCATTTACCAATCTGATATGCGCGCGAATGACCCTGTAGGTGGTTGTTTTAGGTATATCCAAGACCTTCAAGCACAGATCGAATACTGTCACACGGAACTCGAATTAGTTCTTCAACAACTCGCGTTTTTTCGAATGCAAGCTCATCACCAACAACAATCTCAACATGCTTTCAATCCAACAATGAGTAATGTTAATGTTGGTATAAATGGAGAGGATGTTATGAGTGCTGGTGAACCTTTGAGCTTGTATAGGGCGCCCGCGACCGATCATTATCATTATATTTCACAAGTGCCACAACATGAGCATTACATTATGTTGCCAGAGACTAATGAGAATAATTGCAGCAATAATATTAATGACAATACTGCTTTGCGAGAACATGTTAATGCGTGGGCGATGCAGAATTCGATGTCTTTATCGTCGTTGTCATTGCAGGGACAGAATAGTAATGCAAGTGTTGGTGATGAATATGACCCTAAGCCAATGCTTGAGATACCTTGTGATGAAAGAAATGAACTCGAGTTTGAGGCCGAAAATCTACTCCACCAAAGTAATGATGCAGTTTTGTTTAAGATAGATGATGAGGTAACAAAGGAAGAGAGTGATTGTATTCAACAAGCTCAAGATCATGATCTGAAAGGTGCAGCAACTTTGTTTACTCTTACAAATTGTACTAGATGA 915 0.4066 MNYNNNNNPRNGNNTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKFLAPQEKDQAMRTIIYQSDMRANDPVGGCFRYIQDLQAQIEYCHTELELVLQQLAFFRMQAHHQQQSQHAFNPTMSNVNVGINGEDVMSAGEPLSLYRAPATDHYHYISQVPQHEHYIMLPETNENNCSNNINDNTALREHVNAWAMQNSMSLSSLSLQGQNSNASVGDEYDPKPMLEIPCDERNELEFEAENLLHQSNDAVLFKIDDEVTKEESDCIQQAQDHDLKGAATLFTLTNCTR 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0144 304 Pfam Lateral organ boundaries (LOB) domain 18 113 IPR004883 -
Lal18g0144 304 ProSiteProfiles LOB domain profile. 17 118 IPR004883 -
Lal18g0144 304 PANTHER LOB DOMAIN-CONTAINING PROTEIN 22 12 226 - -
Lal18g0144 304 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0144 Lal-Chr18 1144145 1145378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0144 17 133 AS2 family AT3G13850 75.424 5.34e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal18g0144 LOB 2.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0144 - - pvu:PHAVU_010G138500g 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1089 20 15041853 15043593 Lal18g0144 18 1144145 1145378 LSH