Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0122 ATGGGAAGAAGTCCTTGTTGTTCTAAAGAAAGTTTGAGAAGAGGAACATGGACAACTATGGAAGACAAAATCCTCAAAGAATACATTAAGATTCACGGTGAAGGAAAATGGAAACATGTGCCCAAAAGAGCAGGTCTTAAGAGATGTGGGAAAAGTTGTAGGTTAAGATGGTTGAATTATCTTAGACCAGGTATTAAAAGAGGAAATATTACTAACGATGAAGTGGAGCTTATAATAAGACTTCACAACCTTCTTGGAAACAGAAATAATATGCTTAGTAATTAA 285 0.3474 MGRSPCCSKESLRRGTWTTMEDKILKEYIKIHGEGKWKHVPKRAGLKRCGKSCRLRWLNYLRPGIKRGNITNDEVELIIRLHNLLGNRNNMLSN 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0122 94 Gene3D - 7 66 - -
Lal18g0122 94 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 90 - -
Lal18g0122 94 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lal18g0122 94 CDD SANT 16 61 IPR001005 -
Lal18g0122 94 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lal18g0122 94 SUPERFAMILY Homeodomain-like 15 88 IPR009057 -
Lal18g0122 94 SMART sant 13 63 IPR001005 -
Lal18g0122 94 PANTHER TRANSCRIPTION FACTOR TT2 1 90 - -
Lal18g0122 94 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0122 Lal-Chr18 970094 970582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0122 1 93 MYB Transcription Factor Family AT2G16720 63.441 9.07e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal18g0122 Myb_DNA-binding 2.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0122 K09422 - gmx:100809225 169.088