Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0121 ATGGCACAATTCATATCGAGCCGAATCAAACTGAGGTGGTCCTTAATCGCTGGCAGACTTCCAGGACGAACAGACAATGAAATCAAGAACTATTGGAACAAAAATATGAGAAGTAAACTTCAAAATGGTACTACTCCATGCTGCTCCATTAACAGTGCTGAACCATGCTTATCAAAGTCAGTTCAAAAAGAGCATTATCCTTATCCTACAAATAAGGGTTTATGCATGATCCATACTAAAGCAACAACATTGACTCAGGTCACTGTCACAAAAGATATTGCTCAAAAAAATGAAGGGATCAAGACCAATAATGATAACAAAATGAAGGGACCATCACTATCATCAGAAAGAGACACTGAGCTTTTGGATTTCATGGATGACTTTGAGATTGATGACAATTTCTTTTCTGAGCTACTCAAGATGGACTTGCCCAAATCACCTTCTTTGGAAAATAAGATAATGGAAGAAAATTGTAACCCTAACACAGTGGATATAGGTCAGTTTTCTCTTAAATCATCCACTGAAGAAACTCAATTTCTTTGGGGTGAATCAGTGTATGATACAGATTCGGATTTACAGCTGATGGAGGCTCTTCAGGATATTGGATTTGATGATAGACTTTGA 624 0.3734 MAQFISSRIKLRWSLIAGRLPGRTDNEIKNYWNKNMRSKLQNGTTPCCSINSAEPCLSKSVQKEHYPYPTNKGLCMIHTKATTLTQVTVTKDIAQKNEGIKTNNDNKMKGPSLSSERDTELLDFMDDFEIDDNFFSELLKMDLPKSPSLENKIMEENCNPNTVDIGQFSLKSSTEETQFLWGESVYDTDSDLQLMEALQDIGFDDRL 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0121 207 SUPERFAMILY Homeodomain-like 11 42 IPR009057 -
Lal18g0121 207 Gene3D - 4 65 - -
Lal18g0121 207 Pfam Myb-like DNA-binding domain 12 34 IPR001005 -
Lal18g0121 207 CDD SANT 12 36 IPR001005 -
Lal18g0121 207 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 12 168 - -
Lal18g0121 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 40 IPR017930 -
Lal18g0121 207 PANTHER MYB TRANSCRIPTION FACTOR 12 168 - -
Lal18g0121 207 ProSiteProfiles Myb-like domain profile. 1 36 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0121 Lal-Chr18 967880 968719 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0121 12 143 MYB Transcription Factor Family AT5G35550 34.074 1.82e-12 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal18g0121 Myb_DNA-binding 7.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0121 K09422 K16166 gmx:100809225 184.111