Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0117 ATGAAGACATTGGAATTTCTTCATATAAACATGAATTCTTACATCTTATGTTGTATATGTCTTAAACTCTTATTGGCGATGAAGGTGCGGTTGATCGGGTACAGTATAGAGGGTTCTCTTTTCCTTGTCTACGAATTCATTGAGAATGGAAACTTGAGTGAACATCTGCGTGGTTCAGCAAGAGACCCACTGCCATGGCCTACCAGGGTGCAGATTGCTTTGGATTCAGCCAGAGGTCTCGAGTATATTCATGAGCATACCGTGCCTGTATATATTCACCGTGACATAAAGTCAGCAAATATATTAATAGACAAAAACTTCCGGGGAAAGGTTGGATATGTTGCTGATTTTGGTTTGACCAAACTGACAGAAGTTGGAAGCTCGTCGCTTCCCACTGGTCGACTTGTTGGAACATTTGGATACATGCCTCCAGAGTATGCTCAATATGGAGATGTTTCTCCCAAAGTAGATGTGTATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCTGCTAAGGAAGCTATCATCCAAGCAAGTGAATCTATTGCTGACTCAAAGGGCCTTGTAGCATTGTTTGAAGGAGTTCTTAATCAGCCTGATTCAACTGAAGATCTATGCAAATTAGTGGATTCAAGGCTAGGGGATAACTACCCTATTGATTCTGTTAGAAAGCTAGCTCAATTAGGGAAAGCATGTACACAAGACAATCCCCAACTTCGGCCAAGTATGAGATCAATTGTGGTGGCTCTTATGACACTTTCTTCAACTACTGATGAATGGGATGTTGCCTCTTTCTATGAAAATCAAAATCTTGTCAATCTTATGTCAGGAAGATAA 837 0.4026 MKTLEFLHINMNSYILCCICLKLLLAMKVRLIGYSIEGSLFLVYEFIENGNLSEHLRGSARDPLPWPTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVGYVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIIQASESIADSKGLVALFEGVLNQPDSTEDLCKLVDSRLGDNYPIDSVRKLAQLGKACTQDNPQLRPSMRSIVVALMTLSSTTDEWDVASFYENQNLVNLMSGR 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0117 278 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 29 278 IPR044812 GO:0019199|GO:0045087
Lal18g0117 278 ProSiteProfiles Protein kinase domain profile. 1 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0117 278 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 29 278 - -
Lal18g0117 278 SUPERFAMILY Protein kinase-like (PK-like) 29 260 IPR011009 -
Lal18g0117 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 91 103 IPR008271 GO:0004672|GO:0006468
Lal18g0117 278 SMART serkin_6 1 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0117 278 Gene3D Transferase(Phosphotransferase) domain 1 21 274 - -
Lal18g0117 278 Pfam Protein tyrosine and serine/threonine kinase 29 249 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0117 Lal-Chr18 937388 944339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0117 29 278 Receptor kinase-like Gene Family AT3G21630 68.400 3.55e-116 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lal18g0117 PK_Tyr_Ser-Thr 9e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0117 - K13429 gmx:100777781 452.21