Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0106 ATGTCGTTTGTTACGTCTTCAGAACTGCCTACAAAACCATGTACTAATGCCAAGCTCTGCTCGCTAAAGGAAACTTGTGTTAGACCAGGCTTGTCCTCCGGAAATTTTGGTCCGGATAATCACAGAAGCATGTATATGACAGATTCTTACTCCAGTGAGAGTTATGAAAAGTACTTTCTTGATTCACCTACAGGAGAACTGATAGAAGCATCCTGTTCCGGAATCTCGGAAAATTCAATTAGACCTGACGGTGTTTCTTATCAGCTCGGATCTAGTTTAGGGGCTTCTATGAATGTTAATAACCCTTTTGATACTTCTTTCATGTCTACAATGCATCGTAATGCCTACCAGTCCAACTATGGATCAGATTTCTTGGAAAATAGTAGCTTGGATCACCTTGATTTCGACGGGGAAATGAGATTAAAACTACAAGAATTGGAGAGGGCATTGCTTGATGATAATGATGATGATGAGGAGGAAGACATATTTGCGACTGTTCAAAGCATGGAGATTGATCCTGACATTGCGGAGTGGGTTGATCCCATTCAAAATATGCTGCTCCATGACTCACCGAAGGAGTCTTCATCTTCAGAATCCAATCTTAGTAGCATAAGTAGCACAAAAGAAGTATCACATAGCTCTCCTCGGACCCCGAAGCAATTGCTTTACGAATGTGCTCGTGCGCTTTCAGAAGGAAATAAAGATGAAGCCTCGTCTATGATAAATAATCTCAGGCTGATGGTCTCAATACAGGGAGATCCTTCCCAAAGAATTGCAGCCTATATGGTGGAAGGACTTGCAGCTCGTGTCGCATCATCTGGAAAATGTATTTATCAAGCTTTGAGATGTAAGGAACCTCCTTCTTCCGACCGTTTAGCAGCTATGCAGATACTATTTGAGGTCTGCCCATGTTTTAAATATGGATTTATTGCTGCGAACGGGGCAATTTCCGAAGCCGTTAAAGATGACAAGAAGGTTCATATAATAGATTTTGACATAAATCAAGGAAGTCAGTACATAACTCTAATACAAACATTAGCTTCAAGGCCATGTAAGCCACCCCATGTGAGATTGACTGGGGTTGATGATCCCGAGTCTGTGCAGCGATCTGTTGGAGGCCTAAACATCATAGGACAAAGACTAGAAAAGCTGGCAGAAGTGCTTGGATTGCCATTTGAGTTCCGAGCAGTGTCATCGAGGACATCTATTGTCACTCCATCAATGCTCCAATGTCGTCCCGGGGAAGCAATTGTAGTGAACTTTGCATTTCAGCTTCATCACATGCGTGATGAGAGCGTTTCAACGATAAATGAGCGAGATGAACTTCTTCGCATGGTGAAGAGCCTGAATCCAAAACTTGTAACACTTGTGGAACAAGACATGAACACTAACACCGCCCCCTTCCTCCCGAGATTTGTTGAAGCCTACAATTACTATTCTGCTGTGTTTGACTCACTTGATGCAACTCTTCCTAGAGAGAGCCAGGACAGGATGAATGTCGAAAGACAATGCTTGGCAAAGGACATTGTCAATATTGTCGCATGTGAGGGCGAAGATAGAATAGAACGGTACGAGGTTGCCGGAAAATGGAGGGCAAGGATGATGATGGCAGGCTTCACTTCATGCCCAGTGAGTACAAATGTAGTAGAAGCAATTAGGAAACTCATTAAGCAGTACTGTGATAGGTACAAGATAAAGGAGGAAATAGGAGCACTTCATTTTGGATGGGAAGACAAAAACTTAATTGTTGCTTCAGCATGGAAGTGA 1767 0.4273 MSFVTSSELPTKPCTNAKLCSLKETCVRPGLSSGNFGPDNHRSMYMTDSYSSESYEKYFLDSPTGELIEASCSGISENSIRPDGVSYQLGSSLGASMNVNNPFDTSFMSTMHRNAYQSNYGSDFLENSSLDHLDFDGEMRLKLQELERALLDDNDDDEEEDIFATVQSMEIDPDIAEWVDPIQNMLLHDSPKESSSSESNLSSISSTKEVSHSSPRTPKQLLYECARALSEGNKDEASSMINNLRLMVSIQGDPSQRIAAYMVEGLAARVASSGKCIYQALRCKEPPSSDRLAAMQILFEVCPCFKYGFIAANGAISEAVKDDKKVHIIDFDINQGSQYITLIQTLASRPCKPPHVRLTGVDDPESVQRSVGGLNIIGQRLEKLAEVLGLPFEFRAVSSRTSIVTPSMLQCRPGEAIVVNFAFQLHHMRDESVSTINERDELLRMVKSLNPKLVTLVEQDMNTNTAPFLPRFVEAYNYYSAVFDSLDATLPRESQDRMNVERQCLAKDIVNIVACEGEDRIERYEVAGKWRARMMMAGFTSCPVSTNVVEAIRKLIKQYCDRYKIKEEIGALHFGWEDKNLIVASAWK 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0106 588 MobiDBLite consensus disorder prediction 188 217 - -
Lal18g0106 588 Pfam GRAS domain family 219 588 IPR005202 -
Lal18g0106 588 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 587 IPR030011 GO:0003700|GO:0005634
Lal18g0106 588 ProSiteProfiles GRAS family profile. 209 588 IPR005202 -
Lal18g0106 588 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 587 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0106 Lal-Chr18 852363 854129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0106 1 588 GRAS Transcription Factor Family AT1G21450 61.785 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal18g0106 GRAS 8.3e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0106 - - gmx:100807048 911.368