Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0101 ATGTGCATGAAGCTAGGACTCTTGTTTATTTTCTCAACCGCCTTCATGATTGGAGCAATGTTCTTCGGTGTTGGAGCTGAACCAGTGGCAGATAAACAAGCTTTGCTCGATTTCGTTCGCAACATTGATCACACTAGTCTTCTCAACTGGGATAAGACATTTTCTGTATGCACAAGCTGGATAGGAGTGACCTGCAACACTGACCAATCTAGAGTTGTTGCCCTCCAACTACCTAGAGTTGGATTGAATGGTCCAATTCCAACCAACACTCTTAGTCACCTTTCGGCGCTCGAGACTGTGAACCTTATGTCAAATAATATAACTGGCCCTTTCCCTTCTGGTTTCTCTAAGCTAAAGAACTTGACATATCTCTATCTCCAGCATAACAAATTTTCTGGTCCATTACCATTAGATTTTTCAGTTTGGTATAATCTTAATGTTGCAAATTTATCCAACAACTATTTTAATGGGAGCATCCCTTTCTCAGTTTCAAATTTGACTCATCTCACTTCTTTAGCCCTTGCCAACAACTCTCTTTCAGGTGAAATTCCTGATCTCAATATTCCTAGCCTGCAAGAGCTAGATTTTTCAAACAATAACTTCAGTGGGGTTGTTCCTGAATCCCTTCAGAGATTTCCTAGTTGGGTATTTTCTGGTAACAATCTTGAATCAGCACATGCACATGCACTTCCTCATTCTTTTCCTGTTCAGTCACCAAATGCTTCTCATCAAACAAGGAAAACCAAAGGACTTAAGGAACCTGCATTATTAGGCATCACAATTGGTGTTTGTGTGATGGGATTTGCTGTGATTGCAGCTTTCATGATTGTGTGCTGCTATATGAAAGGTGGTGCAGAAAGACAGACAGGTAAGTCCTATAAAAAAGCTGCATCTCCGAAAAAAGAATCTCCTAGAAGTCAAGACAAAAACAATGTTATCTTCTTTGAGGGTTGCAATCTTGCATTTGACCTTGAGGACCTATTGAGAGCTTCTGCTGAGGTGCTTGGGAAGGGTACATTTGGTACTGTTTATAAGGCTGCTTTAGAGGACGCAACAGCGGTGGTGGTGAAGAGGTTGAAGGAGGTCGCAGTTGGCAAACGCGAGTTTGAGCAGCTGATGGAGGCGGTAGGGAGAATTCGGCATGACAATGTGTGTGCACTAAGGGCATATTACTATTCAAAGGAGGAGAAGCTTATGGTATATGATTACTACAAACAGGGCAGTGTTTATGCAATGTTACATGGCAAAAGAGGGGAAGGCAGGGTTTCTCTAGACTGGGATAGCCGGTTAAGAATCGCCATCGGCGTAGCAAGAGGCATTGCTCACATACATGCTCAACATGGAGGTAAACTAATCCATGGAAACATAAAAGCCTCAAATATCTTCATCAACTCCCAAGGATATGGTTGTGTATCTGATATTGGTATGACAACATTGATGAGTCCAACACCTGCACCAGCATTAAGGGCCACAGGATACCGTGCACCAGAAGTAACCGATGCACGAAAAGTGACCCCGGCATCGGATGTATACAGTTTTGGAGTCTTACTACTTGAGCTTCTAACTGGAAAATCACCTATACATGTCATAGGAGGTAAGGAGTTTGTGAACTTGGTTAGATGGGTGAATTCTGTGGTTAGAGAGGAGTGGACTGCAGAAGTGTTTGATGCAGAGTTATTGAGGTATGCAAATATAGAGGAAGATTTGGTTGAGATGCTACAAATAGGTATGGCATGTGTTGTGAAAGTACCATATCAGAGACCAACAATGTATGAGGTGGTGATGATGGTTGAGGAAATTTGTAGAGTTAATAGTACAGGAAATGGATCATCCACTGAATCTAGATCAGAAGGTTCTACTCCAACTGAGATAACCACAACTCTTCCACTATGA 1893 0.4205 MCMKLGLLFIFSTAFMIGAMFFGVGAEPVADKQALLDFVRNIDHTSLLNWDKTFSVCTSWIGVTCNTDQSRVVALQLPRVGLNGPIPTNTLSHLSALETVNLMSNNITGPFPSGFSKLKNLTYLYLQHNKFSGPLPLDFSVWYNLNVANLSNNYFNGSIPFSVSNLTHLTSLALANNSLSGEIPDLNIPSLQELDFSNNNFSGVVPESLQRFPSWVFSGNNLESAHAHALPHSFPVQSPNASHQTRKTKGLKEPALLGITIGVCVMGFAVIAAFMIVCCYMKGGAERQTGKSYKKAASPKKESPRSQDKNNVIFFEGCNLAFDLEDLLRASAEVLGKGTFGTVYKAALEDATAVVVKRLKEVAVGKREFEQLMEAVGRIRHDNVCALRAYYYSKEEKLMVYDYYKQGSVYAMLHGKRGEGRVSLDWDSRLRIAIGVARGIAHIHAQHGGKLIHGNIKASNIFINSQGYGCVSDIGMTTLMSPTPAPALRATGYRAPEVTDARKVTPASDVYSFGVLLLELLTGKSPIHVIGGKEFVNLVRWVNSVVREEWTAEVFDAELLRYANIEEDLVEMLQIGMACVVKVPYQRPTMYEVVMMVEEICRVNSTGNGSSTESRSEGSTPTEITTTLPL 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0101 630 PANTHER OS05G0588300 PROTEIN 14 623 - -
Lal18g0101 630 PANTHER LRR RECEPTOR-LIKE KINASE 14 623 - -
Lal18g0101 630 ProSitePatterns Protein kinases ATP-binding region signature. 335 366 IPR017441 GO:0005524
Lal18g0101 630 Gene3D Ribonuclease Inhibitor 30 141 IPR032675 -
Lal18g0101 630 MobiDBLite consensus disorder prediction 606 630 - -
Lal18g0101 630 Gene3D Transferase(Phosphotransferase) domain 1 405 617 - -
Lal18g0101 630 Pfam Leucine Rich Repeat 190 211 IPR001611 GO:0005515
Lal18g0101 630 SUPERFAMILY L domain-like 42 215 - -
Lal18g0101 630 ProSiteProfiles Protein kinase domain profile. 329 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0101 630 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Lal18g0101 630 Pfam Leucine rich repeat 86 131 IPR001611 GO:0005515
Lal18g0101 630 SUPERFAMILY Protein kinase-like (PK-like) 333 597 IPR011009 -
Lal18g0101 630 Pfam Protein kinase domain 332 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0101 630 Gene3D Ribonuclease Inhibitor 142 245 IPR032675 -
Lal18g0101 630 Gene3D Phosphorylase Kinase; domain 1 294 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0101 Lal-Chr18 823011 826459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0101 20 624 Receptor kinase-like Gene Family AT4G23740 54.502 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal18g0101 Pkinase 1.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0101 - - aprc:113851984 907.901