Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0090 ATGGGCAAAACAAGTTATTGTGCTCTTCAATCCTTTCTTATTTTCTCATTCTTTATTGCTGGAATTCATGGAAATAAACAAACTCAAGCTCTTCGAAAGTTTCATAGGTTAAAATACAAAGCAAGTTCACAAATTGATAGGAGTTACTTTAAACCACAAGAGCTTGTGGGTGATCAAATTATTGATTCTAATAAGGGTCTTAAAGAGAACGATAAGATTAATAGGCTTCCAGGGCAGCCACATGTAAATTTCTCTCAATATGGAGGGTATATCACAATAGATAAATTGGTCGGGCGTGCATTTTACTATTACTTTGTGGAATCTCAGCATTCTCATCAAACAATGCCTCTTCTTCTTTGGCTAAATGGAGGTCCTGGATGTTCATCTCTGGGCTATGGAGCAATGGAAGAACTTGGACCCTTCAGAGTAAAGAATAATGGCAAAACACTTAAGAAAAATAAATATTCATGGAACTATGCTGCAAATGTTTTGTTCCTTGAGTCACCTGGTGGAGTAGGATTTTCTTACTCAAATAATTCATCAGAATATGAAACAACTGGGGATAGGAAAACAGCAGCATATAACTATATATTTTTAGTGAATTGGTTGGAGAGGTTTCCCGAGTATAAGAAAAGGGATTTCTACATAGCTGGAGAGAGCTATGCTGGGCATTTTGTTCCTCAACTTGCTCAAACTATTCTCCATCAGAACAAAAAGGCTAATAATACAATCATCAACCTCAAAGGAATATTGATTGGGAATCCAGTGATCCATGATGAAAGAGACGAAAGAGGAGTGTATGATTTTCTTGCTAGCCATGCAATCATTTCAGACCAAACAGCATATGATTTCAAGAAATATTGTAATTATTCACTTGATCCCAAAGATATACCAACTCAGTGTGACAAAGCACTAGATGAATTTGACAACAACACAGACCCCATTGATCTCTCTAATATCTATGCTCCAATTTGCAAGAATGATCCCGATTATTACCTCACTGCCACTCCTAAGATCAAATCTATTGTTAATGATCCATGTACTGATGATTACGTCAAAGCATATCTTAACCGAGGTGACGTTCAAGAGGCCTTACATGCAAATGTCACCAAGCTCAAATATACCTGGGAGCTTTGCAGTAGCATAATTTCGTGGGGTGATAGCTCTCCAACAATCATTCCCATTTTACATGAACTCTTCAATAATGGACTCAGAGTTTGGATTTTTAGTGGTGATGTAGATGCAATTGTGCCTATTACTGCAACCAAGTATTCTCTTAATGAGATGAATCTATCTACTAAAACACCTTGGCATCCTTGGTTTGTCGATGGAGAGGTAGGTGGATATACCGAAGTGTACAAGGGAGATGTAACTTTTGCCACAGTAAGAGAAGCTGGACATCTAGTATCTGCTTCCCAGCCAAAGAGAGCACTTTCTTTGATCCAACACTTCTTAAATGGAACTCCACTTCAAACTACTAAATGA 1485 0.3758 MGKTSYCALQSFLIFSFFIAGIHGNKQTQALRKFHRLKYKASSQIDRSYFKPQELVGDQIIDSNKGLKENDKINRLPGQPHVNFSQYGGYITIDKLVGRAFYYYFVESQHSHQTMPLLLWLNGGPGCSSLGYGAMEELGPFRVKNNGKTLKKNKYSWNYAANVLFLESPGGVGFSYSNNSSEYETTGDRKTAAYNYIFLVNWLERFPEYKKRDFYIAGESYAGHFVPQLAQTILHQNKKANNTIINLKGILIGNPVIHDERDERGVYDFLASHAIISDQTAYDFKKYCNYSLDPKDIPTQCDKALDEFDNNTDPIDLSNIYAPICKNDPDYYLTATPKIKSIVNDPCTDDYVKAYLNRGDVQEALHANVTKLKYTWELCSSIISWGDSSPTIIPILHELFNNGLRVWIFSGDVDAIVPITATKYSLNEMNLSTKTPWHPWFVDGEVGGYTEVYKGDVTFATVREAGHLVSASQPKRALSLIQHFLNGTPLQTTK 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0090 494 SUPERFAMILY alpha/beta-Hydrolases 75 490 IPR029058 -
Lal18g0090 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 153 165 IPR001563 GO:0004185|GO:0006508
Lal18g0090 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 176 IPR001563 GO:0004185|GO:0006508
Lal18g0090 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 202 227 IPR001563 GO:0004185|GO:0006508
Lal18g0090 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 457 470 IPR001563 GO:0004185|GO:0006508
Lal18g0090 494 ProSitePatterns Serine carboxypeptidases, serine active site. 216 223 IPR018202 GO:0004185
Lal18g0090 494 Pfam Serine carboxypeptidase 78 487 IPR001563 GO:0004185|GO:0006508
Lal18g0090 494 Gene3D alpha/beta hydrolase 67 327 IPR029058 -
Lal18g0090 494 PANTHER CARBOXYPEPTIDASE 12 491 - -
Lal18g0090 494 Gene3D - 392 487 - -
Lal18g0090 494 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 491 IPR001563 GO:0004185|GO:0006508
Lal18g0090 494 Gene3D - 347 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0090 Lal-Chr18 734702 740795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0090 352 490 Calmodulin-binding Proteins AT2G22960 30.935 4.23e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0090 K16297 - gmx:100783864 651.358