Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0078 ATGGGGCAACAACAAGTGCTTCCTTTTTCTTCAATGAGTAAGTGGACTCATGATGTTTTTCTTAGCTTTAGAGGAGAAGATACTCGCTATGGTTTCACTGGAAATCTCTACCATGCATTGCATCAAAGGGGTATCAAGACTTTCATGGATGATGAGGTGCTTAAGAGAGGGGAAGAGATTTCCCATGCCCTTTTTAAAGCTATTCAAGACTCCAAGATCATTATTATTGTGTTCTCTAAAAGCTACCCTTCCTCAAAATGGTGTCTTAATGAACTTGTGAAAATCATGGAGTGTTTTAAAGCCAATGAATGTGTGGTTTATCCAGTTTTTTACAAAGTTGATCCATCAGAGGTAAGGCATCAGAAAGGAAGTTATGGAGAACAATTGGCTAAGCATGAACTGAAACTAAAGGATGATAGTAAGAAGGTGGAAAAGTGGAGATTGGTTCTTCACGAAGCAGCTAATTTAGCAGGGTGGCATTTTAGAGATGGGTATGAATATGAATTTGAATTCATGAAAGGGATCATTGACATGGTGTCTAGCAAACTAGATCGTCATCTTTTACATGTTGCTGATTATCCAGTTGGACTAGAGAGTCGAGTACGTGAAGTAATACTTCGTTTGAGTATCTCTGATCCTAATGTCACAATGGTAGGACTATGTGGAATCGGAGGAATTGGTAAAACTACTTTGGCACGAGCCGTATATAATTCCATTCGCCACCGATTCGAAGGTTTATGCTTTCTCTCCGATGTTAGAGAAAACTCTATCAAACACGGGTTAGTACATCTCCAAGAGGCAATCCTTTCTGATATATCCGGTGAGAAGAATAACAAGTTGGGTGATGTTCATTTCGGAATTCCAGTCCTTGTAAGAAGGTTGGAACATAAAAGGGTTCTTCTGATACTTGATGATGTGGATAAGTTGGAGCAGTTAAAGAAATTAGCAGGAGGATGCAATTGGTTTGGTTCAGGCAGTAGGATTATTATAACTACTAGGTGTAGAGATATTCTAGCTTCTCATGGAGTTGGAAAAATCTATGATGTACCTGAGTTAAGTCATTATGAAGCACTTCAACTTTTAAGTTGGAATGCATCCAAAAAATCTCAATCCAATGCAAGTTATATTGCAGTGTGGAACCGCGCCGTCCTCTATTCCAATGGCCTTCCATTGGCTTTGAACATTATAGGTTCTGATCTATTAGGAAAATCTGCAGATGAATGGGAGTTTGCATTAGACAGATATGAAAAAGTTCCTAATGAAGAAATTCAGAGTATACTTAAAGTAAGTTATGATAGTTTGAATGAAAGCGAGAAGAGAATTTTCCTTGACATCGCATGTTTCTTCGTCGGAGAGACATTGCCACATGTTGAAGAAATACTATCTGCTTGTGGTTTCTACCCAAAATATGGTATTGGCATACTTATTGATAGATCTCTCATATCCATCACATTCAATGGAAGGTTGATGATGCATGACCTTATAAAAGACATGGCTGTAGAAATACAACGACAGGAATCACCCCTGCATCTTGGCAAACGTAGTAGGTGTGGAATGTGGCTTTGGGAGACTTTGGGCTCTCCCAAAGCCACTAGCTGGTGTGGTTTTCCTAAGGGCACTGATAAAATTGAAGGCATAATGTTGGACTACTTACCACAAGGAAAAGAAGTTGTGCAGTTGAGTGAAAAGGCTTTCAAGAAGATGAAGAGTCTGAGAATACTAATTATTAAGACTGGCTCATTTTATGGAGTCCCCAAACATCTTCCAAACAGCTTAAGAGTTCTGGAATGGAGAGGATTTCATTTGAGTATTATATCTGATTATTGTTGTTTTCAATTACAGAATATGGAGTGCTTGACTAGAATGGATTTCACTGACTGTAAAGTCCTATCAGAAGTACCTGATGTGTCTGGAGTTCCAAACTTAAAGACATTGCATCTAGATAATTGTATGAATCTGATAAAAATTCATGATTCTGTTGGAAGTCTTGGTAACCTTGAAGAGCTGAATGCTGCAGGATGCACCAATTTAGAATCAATTCCATTTGCTTTCAAATTGGCATCTCTTAGATTTCTCTCTTTCTCTGAGTGCTCCAAACTTGTGAGGTTCCCAGAAATATTGTGTAAGACAGAGAATTTAAGGCATGTCAATTTGTGGCAAACTGCCATAGAAGAGTTACCATTTTCTATTAGAAATTTGGTAGGCCTTGAATCTTTAACTTTGATGGATTGTACCAGGCTACTTAAGCTACCTAATAGTATTTTTACTTTACCAAGACTTCAGGAAATTGAAGCTGACTCATGTAGAGGGTTTAGTTTTCCCAAGAAGTGTGAAATTCATGGACAACTGCAATTAACTGTGTCTTCAAACAAGATTCATCTTTATCTGAGTTCTTGCAATTTAACAGATGAACATCTTGTTATATGCCTGACTGGTTTTGCCAATGTGGTACATTTGGACTTATCTTACAATAATTTTATAGTCCTTCCAGAATGCATTGAAGAATGTATCCACTTGAAGACTCTTTTGCTGATAGGATGCAAGCAGCTTCAAGACATCTTACTGATTCCCCCAAAATTAGATGATATAGATGCATCAAACTGCACATCATTGACCTCCAAATCCGCAAGTGTACTACTGAGCCAGGCCTTTCATGATGCTGGGGACAAGATTTTGATGCTTCCAGGGTCAACAATTCCACAATGGTTTGATCGTTGTATCCAGGAAAAAAGATCAATAACTTTCTGGGGTCGTGAGCAATTCCCGAAGATTTGTGTGTGTGCTGCTTTTGGAGTGTCGGAAAATCTACCGCACCATTTTCGTGTAAGGCTTGGCATACTCATCAATGGCGAGCGAAAGATACTATCCAAATGTTACAGTTGGTCAATAGTGACAGACCATGTGTGGTTGTTTGATCTAAGAGTCCTTGTTAATGATAGCAATCTCAGGGGAACATTTATGAAGCATGATTGGAATCATGTGGAAGTTGCATTAGAGGATTACCAAGTGGAGTATTCAACTGCACAAGTTAAGCATGAGCCAACAAGAATGGCAACTGTAAAATGGTTTGGAATTCATGCATACAGGCATGAAAACAGTACTGTGAATATCTTATTCACAAATGCCACAACTCTGCAAGAAAGTAATGGTAATTTTGATACAGTTAGTGAATTACATGATTGA 3183 0.3839 MGQQQVLPFSSMSKWTHDVFLSFRGEDTRYGFTGNLYHALHQRGIKTFMDDEVLKRGEEISHALFKAIQDSKIIIIVFSKSYPSSKWCLNELVKIMECFKANECVVYPVFYKVDPSEVRHQKGSYGEQLAKHELKLKDDSKKVEKWRLVLHEAANLAGWHFRDGYEYEFEFMKGIIDMVSSKLDRHLLHVADYPVGLESRVREVILRLSISDPNVTMVGLCGIGGIGKTTLARAVYNSIRHRFEGLCFLSDVRENSIKHGLVHLQEAILSDISGEKNNKLGDVHFGIPVLVRRLEHKRVLLILDDVDKLEQLKKLAGGCNWFGSGSRIIITTRCRDILASHGVGKIYDVPELSHYEALQLLSWNASKKSQSNASYIAVWNRAVLYSNGLPLALNIIGSDLLGKSADEWEFALDRYEKVPNEEIQSILKVSYDSLNESEKRIFLDIACFFVGETLPHVEEILSACGFYPKYGIGILIDRSLISITFNGRLMMHDLIKDMAVEIQRQESPLHLGKRSRCGMWLWETLGSPKATSWCGFPKGTDKIEGIMLDYLPQGKEVVQLSEKAFKKMKSLRILIIKTGSFYGVPKHLPNSLRVLEWRGFHLSIISDYCCFQLQNMECLTRMDFTDCKVLSEVPDVSGVPNLKTLHLDNCMNLIKIHDSVGSLGNLEELNAAGCTNLESIPFAFKLASLRFLSFSECSKLVRFPEILCKTENLRHVNLWQTAIEELPFSIRNLVGLESLTLMDCTRLLKLPNSIFTLPRLQEIEADSCRGFSFPKKCEIHGQLQLTVSSNKIHLYLSSCNLTDEHLVICLTGFANVVHLDLSYNNFIVLPECIEECIHLKTLLLIGCKQLQDILLIPPKLDDIDASNCTSLTSKSASVLLSQAFHDAGDKILMLPGSTIPQWFDRCIQEKRSITFWGREQFPKICVCAAFGVSENLPHHFRVRLGILINGERKILSKCYSWSIVTDHVWLFDLRVLVNDSNLRGTFMKHDWNHVEVALEDYQVEYSTAQVKHEPTRMATVKWFGIHAYRHENSTVNILFTNATTLQESNGNFDTVSELHD 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0078 1060 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Lal18g0078 1060 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 1052 IPR044974 GO:0006952
Lal18g0078 1060 SMART till_3 16 156 IPR000157 GO:0007165
Lal18g0078 1060 Pfam NB-ARC domain 198 437 IPR002182 GO:0043531
Lal18g0078 1060 Gene3D - 351 435 IPR042197 -
Lal18g0078 1060 SUPERFAMILY L domain-like 558 877 - -
Lal18g0078 1060 Pfam TIR domain 17 183 IPR000157 GO:0007165
Lal18g0078 1060 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 1052 - -
Lal18g0078 1060 Gene3D - 10 186 IPR035897 -
Lal18g0078 1060 Gene3D Ribonuclease Inhibitor 553 698 IPR032675 -
Lal18g0078 1060 CDD AAA 195 333 - -
Lal18g0078 1060 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 445 IPR027417 -
Lal18g0078 1060 Gene3D - 187 345 IPR027417 -
Lal18g0078 1060 Gene3D Ribonuclease Inhibitor 699 882 IPR032675 -
Lal18g0078 1060 PRINTS Disease resistance protein signature 217 232 - -
Lal18g0078 1060 PRINTS Disease resistance protein signature 293 307 - -
Lal18g0078 1060 PRINTS Disease resistance protein signature 386 400 - -
Lal18g0078 1060 PRINTS Disease resistance protein signature 684 700 - -
Lal18g0078 1060 SUPERFAMILY "Winged helix" DNA-binding domain 422 511 IPR036390 -
Lal18g0078 1060 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 159 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0078 Lal-Chr18 613661 618822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0078 8 768 WRKY Transcription Factor Family AT4G12020 28.947 3.61e-70 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0078 - - gmx:100796191 1286.94