Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0063 ATGGATGACAAAGAACACAACAACCAAGATCATAACCACCCATCTCTTGTCCCTAATCATAACACCACAAATACCATTACTCCAAAGAAAGAGTCTCTAAGAAAACCTATTATTGGTGGTGGTGGTGGTGGTGATAGGCTGAAGAGAGATGAGTGGAGTGAAGGAGCTGTGTCCACTCTTCTTGAGGCTTATGAAGCCAAATGGGTGCTTAGAAATAGGGCTAAACTCAAAGGTCAAGACTGGGAAGATGTTGCAAGATATGTTTCAACAAGAGCAAATTCTACCAAATCACCAAAGACACAAACACAGTGCAAAAACAAGATAGAGTCTATGAAGAAACGGTATAGATCAGAATCAGCAACTTCAGATGCTTCAACTTGGCCTTTATATTCTCGTCTTGATCTTCTGCTGCGTGGAACTGGGCCAGTATCTACTATACTACCACCACCTTCTCAATCACTATACCCTAGCAATAATAACCAACCGTTGATGTTGTTAGAGCCATCACTGGCGGTGTCACAACCACCACCTCCGTCCGCTCCACCACCGCATGCAACTGCACAAAACTCACATGGCTCCAATGGTGTTGATAGATTAGCCAAGGAAGATGGGTTAGGAACTAAGTCATCTGAGCAAGTATCTAACAAGAATTCATTGGACACGGATAGCAGCACACCTGCACTTTACAGTGAAAAAGACAATGTAAGATTCAACAAGAAGAAGATGAAAATGGACAACAACAAACGGCAAAGGAAAGAACACATGGACATAGCAGAAAGTTTAAGGTGGTTAGCAGAAGTTGTTGTAAGATCAGAACAAACAAGAATGGATACAATGAAAGAGATAGAGAGGATGAGAGTTGAAGCTGAGGTCAAGAGAGGTGAAATGGATCTTAAGAGAACTGAAATCATTGCCAATACACAATTAGAGATTGCTAAGATCTTTGCAAGTGTCAATAAAGGTGTTGATTCATCATTAAGAATTGGAAGAAGCTAA 996 0.4106 MDDKEHNNQDHNHPSLVPNHNTTNTITPKKESLRKPIIGGGGGGDRLKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGQDWEDVARYVSTRANSTKSPKTQTQCKNKIESMKKRYRSESATSDASTWPLYSRLDLLLRGTGPVSTILPPPSQSLYPSNNNQPLMLLEPSLAVSQPPPPSAPPPHATAQNSHGSNGVDRLAKEDGLGTKSSEQVSNKNSLDTDSSTPALYSEKDNVRFNKKKMKMDNNKRQRKEHMDIAESLRWLAEVVVRSEQTRMDTMKEIERMRVEAEVKRGEMDLKRTEIIANTQLEIAKIFASVNKGVDSSLRIGRS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0063 331 Gene3D - 52 117 - -
Lal18g0063 331 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 26 327 - -
Lal18g0063 331 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 26 327 IPR044823 -
Lal18g0063 331 MobiDBLite consensus disorder prediction 12 30 - -
Lal18g0063 331 MobiDBLite consensus disorder prediction 169 239 - -
Lal18g0063 331 MobiDBLite consensus disorder prediction 207 231 - -
Lal18g0063 331 MobiDBLite consensus disorder prediction 1 49 - -
Lal18g0063 331 Pfam Myb/SANT-like DNA-binding domain 49 135 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0063 Lal-Chr18 502570 505204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0063 41 145 Trihelix Transcription Factor Family AT3G14180 36.697 7.01e-17 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal18g0063 Myb_DNA-bind_4 6.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0063 - - qsu:112010896 450.669