Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0059 ATGAAAATCCCTTGTTGTTCGGTGTGCCAAACACGTTACAACGAGGAAGAGCGAGTTCCGCTTCTTCTACAATGCGGTCACGTTTTCTGCAGAGAATGTCTTTCTACAATGTTCTCTGCTTCTTCAGACGCAACCATGACGTGTCCTCGCTGCCGCCACGTGTCCATCGTTGGTAACTCCGTTCAGGCACTCCGCAAGAATTTCGCCGTTCTCGCACTCATCCACTCCGCCGCCGATGCTGCGAATTTGGACTGTGACTACACTGACGACGATGAGGAGGAGGACGAGGAGAAGCGGCAGCGGCTGTGTGGGTCGCAGACATCCAGTTCCGGAGGGTGTGAGAAGGTGATTGAGGTCGGGGCGCACCAGGAGATGAAACTGATGGAGCGGATTGGGGAGGGGAGGAGGGCGGGAGTGGAGATGTGGAATGCGGTGATTGGTGGAAGTGATCGGCGGCGACATCATGTGGCGGTGAAGAAGGTGGTGGTAATGGAAGGAATGGATTTGGAATGGATGCAGGGGAAGTTGGAGAATCTGCGTAGGGCTTCAATGTGGTGTAGGAATGTGTGTACTTTTCATGGAGCAATGAAAGTGGAAGAGAGTTTGTGTCTTGTGATGGATAAGTGCTATGGATCAGTTCAGTCTGAAATGCAGCGGAATGAAGGGAGACTCACTTTGGACCAAGTCCTAAGCGCAGCTCATTATGTGCATCGCAGCTTGTGTGACCGCAGCTTGTGTGACGTGGGTTGTTGCAAGGCTGTTACGTTGGGATTCTCACCCTGCATTGTGCAATGTCATGGTTGTGAACACTATCAAACTGCAATATTGAGATACGGGGCAGACATTGCACGCGGGGTTCTTGAGCTTCATGCTGCAGGCGTTGTTTGCATGAATTTAAAACCTTCCAATCTTCTTCTCAATGCAAATGGTCATGCAGTGGTTTCTGATTATGGACTTGCTACAATTCTGAAGAAGCCTTCCTGCTGGAAGGCTCGACCAGAGTGTGACTCCTCAAAGATCCATTCCTGTATGGAATGTATAATGCTTAGTCCACATTATACAGCACCCGAGGCTTGGGAGCCTGTGAAGAAGTCTTTAAATTTGTTCTGGGATGATGCAATAGGTATATCTTCTGAGTCAGACGCCTGGAGTTTTGGCTGTACATTGGTGGAAATGTGCACGGGTTCCACTCCTTGGGCTGGTTTAAGTGCAGAGGAAATTTATCGAGCAGTTGTTAAGGCAAAGAAATTGCCTCCACAATATGCTAGTGTGGTTGGTGGTGGAATTCCAAGAGAATTGTGGAAGATGATTGGAGAGTGCTTGCAGTTCAAGCCATCTAAAAGGCCTTCTTTTAACGCAATGTTAGCAATATTTCTCCGTCATTTGCAAGAAGTACCACACAGTTCTCCTGCAAGCCCTGATAATGACTTAACTAAAGGTTTTGTGTCAAATGTGACCGAACCTTCCGAAGTACCTGAATTAGAAGTTCCTCAGGAAAATCCAAATCATCTTCATCGACTTGTGTCTGAAGGGGATGCCACAGGTGTTAGAGATCTTCTTGCAAAGGCGTTATTAGAAAATGGTAACAACTACATATCTTCTGTATTGGAAGCCCAAAATGCTGATGGTCAAACGGCTCTCCACTTAGCTTGTAGGCGTGGTAGTGCAGAACTTGTTGAGGCAATTTTGGAGTATGAAGAGGCAAATGTTGATGTCTTGGACAAAGATGGAGATCCTCCTCTTGTTTTTGCACTGGCAGCTGGGTCCCCAGAATGTGTTCGTAGCCTAATCACGCGAAATGCTAATGTGAGGTCACGATTGAGAGATGGCTTGGGCCCATCTGTGGCTCACGTTTGTGCCTATCATGGCCAACCGGATTGTATGCGAGAATTACTATTAGCTGGAGCTGATCCTAATGCAGTGGATGATGAAGGTGAATCTGTACTTCATAGGGCAATTTCCAAGAAGTACACAGACTGTGCTCTCATGATATTGGAAAATGGGGGTTGTAGATCAATGGCCATCTTGAATTCAAAGAATTTGACACCACTGCATTTGTGCGTGGCAACATGGAATGTCACCGTTGTGAAGAGATGGGTGGAAATTGCAACTTCTGATGAGATTACCGAAGCAATTAACATACCTAGCTCCATCGGCACTGCCTTGTGCATGGCAGCTGCATCTAAGAAAGACCATGAAAGTGAGGGTAGAGAACTGGTGCGGATATTGCTTGCAGCAGGAGCAGATCCATCTGCTCAAGATTCACAGAATGGAAGGACCGTTTTGCATACAGCTGCTATGACTAATGATGTGGACTTGGTTAAGGTTATTCTTGCTGCTGGTGTTGATGTGAATATTCGCAATGTGCATAACAGTATACCTCTTCACTTATCCTTAGTTCGGGGTGCGAAGGCATGTGTTGGACTACTTCTAGCTGCTGGGGCAGATTGTAATTTGCAGAATGATGATGGTGACACTGCTTTCCATATAGCAGCAGAGACAGCAAAAATGATACGTGAAAATCTTGATTGGCTTATTGTTATGCTAAGGAATCCCAATGCTGATATTGTAGTCAGAAACCACAGCGGCAAGACCCTTCATGATATCTTGGAGGCCCTCCCCCGAGAATGGATATCAGAAGATCTGATGGAGGCACTCATGAGTAGAGGAGTTTGTTTGTCTCCTACTATATTTGAAGTGGGAGATTGGGTGAAGTTTAGAAGAACTGTCGTAACTCCAACCAATGGGTGGCAAGGTGCTAGACAGAAGAGTGTTGGCTTTGTGCAAAGTGTTCCAGACAGAGATAATATCATTGTTTCATTTTGTTCTGGAGAGGTTCATGTTCTGGCAAATGAAGTTGTAAAAGTCATTCCATTGGACAGGGGACAACATGTACAGCTAAAAGAAGATGTAAAAGAGCCCAGGTTTGGTTGGCGTGAGCGGGCACGTGACAGCATTGGGACAGTATTATGTGTTGATGATGATGGTATCCTCCGTGTTGGGTTTCCTGGAGCATCTAGAGGATGGAAAGCTGACCCAGCTGAGATGGAACGGGTTGAGGAATTCAAGGTTAGAGACTGGGTTCGTATCCGTCCTAATCTAACTTCTGCTAAGCATGGTTTAGGATCTGTGACACCGGGAAGCATTGGAATTGTGTATTGTATTAGACCAGACAGTAGTCTGTTAATAGAACTGAGCTATCTTCCAAATCCATGGTATTGTGAACCAGAGGAGGTTGAGCATGTTGCTCCCTTTAGGATTGGCGATCGGATATGTGTGAAGCGGTCTGTCGCAGAACCTAGATATGCTTGGGATGGTGAGACACATCATAGTGTTGGAAGAATAAGTGAGATTGAAAATGATGGTCTCTTAATAATAGATATACCAAACCGGCCCATTCCATGGCGGGCTGATCCATCTGATATGGAGAAGGTGGAAGATTTGAAGGTTGGTGATTGGGTCAGAGTGAAAGCTTCAGTGTCGTCTCCAAAATATGGGTGGGAGGATATTACAAGGAACAGTATTGGGATAATTCATAGCTTGGATGAGGATGGTGATATGGGTGTTGCCTTTTGCTTCAGAAGTAAGCCTTTTTCTTGCTCAGTAACTGATGTGGATGAAGTCCCTCCTTTTCAGGTGGGACAAGAAATTCATGTCATGGCATCTGTTACTCAGCCACGACTTGGATGGTCAAATGAATCACCAGCTACTGTTGGAAAAGTAGTGAGGATCGACATGGATGGTGCTCTCAATATAAAATGCGCTGGATATACGCGGCACAGAAGACGACCCTCTTCAGTGAGGAATCATTCTGGAATATCAGAACAAGTTACAAATCGATCAGTTCGATTTGAAGTGAGAACAGCTGCAGTGAATTGTTGCCATGCAAAGGAAATATTTCTCGGTTATTTTGTTGTTGGAAGTGGTAGAGTAAAAGAAGAGCGTAGTGGGGCAACCATAGTGAGAGTCACTGGTAGGCAGAGCTTGTGGAAAGTTTCTCCTGGAGATGCAGAACAACTTCCAGGATTTGAAGTTGGTGATTGGGTTCGCTCAAAACCAAGCCTGGGTACCAGACTAAGTTATGACTGGAATAATGTTGGGAGAGAAAGTTTAGCTGTTGTGCACAGTGTACAGGATTCTGAATACTTAGAGTTAGCTTGCTGTTTCCGTAAAGCGAAGTGGATCACTCACTACACTGATATTGAAAAGGTTCCAAGATTTAAAGTCGGGCAGTATGTTAGGTTCCGAACTGGTTTGATTGAACCAAGATGGGGCTGGAGAGGAGCTCAGCCTGAATCGCAAGGGGTTATAACAAGCATTCACGCTGATGGAGAAGCCAGGGTTGCGTTCTTCGGTTTACCTGGATTGTGGAGAGGAGATCCTTCAGACCTGCAGATTGAGCAAATGTTTGAAGTGGGAGAGTGGGTGAGGTTGAAAGATAATGCAAATAATTGGAAATCAATTGGTCCAGGTAGTGTTGGAGTTGTACAAGGAATAGGGTATGAAGGAGATGGATCGGACAGAAGCACTCACGTTGGCTTCTGTGGGGAGACAGAAAAGTGGATAGGACCGAGTTCCCATCTTGAAAGAGTTGACAAGCTTTCTGTTGGACAGAAGGTTAGAGTTAACAAACATGTAAAGCAACTAAGATTTGGGTGGTCAGGGCACACTCATGCCAGTATTGGAACTATACAAGCAATTGATGCTGATGGAAAACTTCGAATATATACACCAGCAGGATCAAAAGCATGGATGTTGGATCCATCAGAAGTGGAGATAGTAGAAGAGAAAGAGCTTTGCATTGGAGACTGGGTAAGGGTTAGAGCATCAGTTTCAACCCCAACCCACCAGTGGGGGGAAGTGAGTCATTCAAGCATTGGGGTGGTGCATCGGATGGAAGATGAGGATCTCTGGGTGGCGTTCTGTTTTATGGAGAGGCTATGGCTATGTAAGGCATGGGAAGTGGAGCAGATTAGGCCATTTAAAGTGGGGGATAAGGTAAAGATCAGAGATGGACTGGTGACCCCACGATGGGGATGGGGAATGGAGACACATGCCAGCAAGGGACAGGTAGTAGGTGTCGATGCAAATGGCAAACTAAGAATAAAATTCCGGTGGAGGGAAGGGAGACCCTGGATAGGAGACCCTGCTGACATCGCCCTCGATGAGAACTGA 5175 0.4603 MKIPCCSVCQTRYNEEERVPLLLQCGHVFCRECLSTMFSASSDATMTCPRCRHVSIVGNSVQALRKNFAVLALIHSAADAANLDCDYTDDDEEEDEEKRQRLCGSQTSSSGGCEKVIEVGAHQEMKLMERIGEGRRAGVEMWNAVIGGSDRRRHHVAVKKVVVMEGMDLEWMQGKLENLRRASMWCRNVCTFHGAMKVEESLCLVMDKCYGSVQSEMQRNEGRLTLDQVLSAAHYVHRSLCDRSLCDVGCCKAVTLGFSPCIVQCHGCEHYQTAILRYGADIARGVLELHAAGVVCMNLKPSNLLLNANGHAVVSDYGLATILKKPSCWKARPECDSSKIHSCMECIMLSPHYTAPEAWEPVKKSLNLFWDDAIGISSESDAWSFGCTLVEMCTGSTPWAGLSAEEIYRAVVKAKKLPPQYASVVGGGIPRELWKMIGECLQFKPSKRPSFNAMLAIFLRHLQEVPHSSPASPDNDLTKGFVSNVTEPSEVPELEVPQENPNHLHRLVSEGDATGVRDLLAKALLENGNNYISSVLEAQNADGQTALHLACRRGSAELVEAILEYEEANVDVLDKDGDPPLVFALAAGSPECVRSLITRNANVRSRLRDGLGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGESVLHRAISKKYTDCALMILENGGCRSMAILNSKNLTPLHLCVATWNVTVVKRWVEIATSDEITEAINIPSSIGTALCMAAASKKDHESEGRELVRILLAAGADPSAQDSQNGRTVLHTAAMTNDVDLVKVILAAGVDVNIRNVHNSIPLHLSLVRGAKACVGLLLAAGADCNLQNDDGDTAFHIAAETAKMIRENLDWLIVMLRNPNADIVVRNHSGKTLHDILEALPREWISEDLMEALMSRGVCLSPTIFEVGDWVKFRRTVVTPTNGWQGARQKSVGFVQSVPDRDNIIVSFCSGEVHVLANEVVKVIPLDRGQHVQLKEDVKEPRFGWRERARDSIGTVLCVDDDGILRVGFPGASRGWKADPAEMERVEEFKVRDWVRIRPNLTSAKHGLGSVTPGSIGIVYCIRPDSSLLIELSYLPNPWYCEPEEVEHVAPFRIGDRICVKRSVAEPRYAWDGETHHSVGRISEIENDGLLIIDIPNRPIPWRADPSDMEKVEDLKVGDWVRVKASVSSPKYGWEDITRNSIGIIHSLDEDGDMGVAFCFRSKPFSCSVTDVDEVPPFQVGQEIHVMASVTQPRLGWSNESPATVGKVVRIDMDGALNIKCAGYTRHRRRPSSVRNHSGISEQVTNRSVRFEVRTAAVNCCHAKEIFLGYFVVGSGRVKEERSGATIVRVTGRQSLWKVSPGDAEQLPGFEVGDWVRSKPSLGTRLSYDWNNVGRESLAVVHSVQDSEYLELACCFRKAKWITHYTDIEKVPRFKVGQYVRFRTGLIEPRWGWRGAQPESQGVITSIHADGEARVAFFGLPGLWRGDPSDLQIEQMFEVGEWVRLKDNANNWKSIGPGSVGVVQGIGYEGDGSDRSTHVGFCGETEKWIGPSSHLERVDKLSVGQKVRVNKHVKQLRFGWSGHTHASIGTIQAIDADGKLRIYTPAGSKAWMLDPSEVEIVEEKELCIGDWVRVRASVSTPTHQWGEVSHSSIGVVHRMEDEDLWVAFCFMERLWLCKAWEVEQIRPFKVGDKVKIRDGLVTPRWGWGMETHASKGQVVGVDANGKLRIKFRWREGRPWIGDPADIALDEN 1724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0059 1724 ProSiteProfiles Ankyrin repeat profile. 611 643 IPR002110 GO:0005515
Lal18g0059 1724 Gene3D - 494 672 IPR036770 -
Lal18g0059 1724 ProSiteProfiles Protein kinase domain profile. 125 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0059 1724 ProSiteProfiles Ankyrin repeat profile. 757 789 IPR002110 GO:0005515
Lal18g0059 1724 SUPERFAMILY Protein kinase-like (PK-like) 126 482 IPR011009 -
Lal18g0059 1724 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 2 252 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Lal18g0059 1724 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 273 1271 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Lal18g0059 1724 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1314 1723 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Lal18g0059 1724 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Lal18g0059 1724 ProSiteProfiles Ankyrin repeat region circular profile. 542 564 - -
Lal18g0059 1724 SMART ring_2 6 51 IPR001841 -
Lal18g0059 1724 ProSiteProfiles Ankyrin repeat profile. 542 575 IPR002110 GO:0005515
Lal18g0059 1724 Pfam Ankyrin repeats (many copies) 614 663 IPR002110 GO:0005515
Lal18g0059 1724 Gene3D - 798 878 IPR036770 -
Lal18g0059 1724 Pfam Ankyrin repeats (3 copies) 520 604 IPR002110 GO:0005515
Lal18g0059 1724 Pfam Ankyrin repeats (3 copies) 736 821 IPR002110 GO:0005515
Lal18g0059 1724 PRINTS Ankyrin repeat signature 543 558 IPR002110 GO:0005515
Lal18g0059 1724 PRINTS Ankyrin repeat signature 739 753 IPR002110 GO:0005515
Lal18g0059 1724 ProSiteProfiles Ankyrin repeat profile. 790 822 IPR002110 GO:0005515
Lal18g0059 1724 SUPERFAMILY RING/U-box 5 57 - -
Lal18g0059 1724 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Lal18g0059 1724 Pfam Mind bomb SH3 repeat domain 1022 1142 IPR040847 -
Lal18g0059 1724 Pfam Mind bomb SH3 repeat domain 1600 1718 IPR040847 -
Lal18g0059 1724 Pfam Mind bomb SH3 repeat domain 898 1016 IPR040847 -
Lal18g0059 1724 Pfam Mind bomb SH3 repeat domain 1343 1464 IPR040847 -
Lal18g0059 1724 Pfam Mind bomb SH3 repeat domain 1470 1591 IPR040847 -
Lal18g0059 1724 Pfam RING-type zinc-finger 6 49 IPR027370 -
Lal18g0059 1724 ProSiteProfiles Ankyrin repeat profile. 576 608 IPR002110 GO:0005515
Lal18g0059 1724 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG-LIKE 1314 1723 - -
Lal18g0059 1724 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG-LIKE 273 1271 - -
Lal18g0059 1724 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG-LIKE 2 252 - -
Lal18g0059 1724 ProSiteProfiles Ankyrin repeat region circular profile. 757 788 - -
Lal18g0059 1724 Gene3D Transferase(Phosphotransferase) domain 1 266 487 - -
Lal18g0059 1724 SMART ANK_2a 823 858 IPR002110 GO:0005515
Lal18g0059 1724 SMART ANK_2a 611 640 IPR002110 GO:0005515
Lal18g0059 1724 SMART ANK_2a 644 675 IPR002110 GO:0005515
Lal18g0059 1724 SMART ANK_2a 576 605 IPR002110 GO:0005515
Lal18g0059 1724 SMART ANK_2a 679 710 IPR002110 GO:0005515
Lal18g0059 1724 SMART ANK_2a 542 572 IPR002110 GO:0005515
Lal18g0059 1724 SMART ANK_2a 757 786 IPR002110 GO:0005515
Lal18g0059 1724 SMART ANK_2a 790 819 IPR002110 GO:0005515
Lal18g0059 1724 SMART ANK_2a 717 752 IPR002110 GO:0005515
Lal18g0059 1724 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 84 IPR013083 -
Lal18g0059 1724 Pfam Protein tyrosine and serine/threonine kinase 126 455 IPR001245 GO:0004672|GO:0006468
Lal18g0059 1724 ProSiteProfiles Ankyrin repeat region circular profile. 790 822 - -
Lal18g0059 1724 Gene3D - 673 797 IPR036770 -
Lal18g0059 1724 Gene3D Transferase(Phosphotransferase) domain 1 103 242 - -
Lal18g0059 1724 SUPERFAMILY Ankyrin repeat 538 833 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0059 Lal-Chr18 466453 487875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0059 258 455 MAP Kinase Kinase Kinase AT4G08500 28.019 8.27e-13 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lal18g0059 PK_Tyr_Ser-Thr 9.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0059 K16279 - gmx:100777576 2526.51