Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0055 ATAAGAATGGATAGTATTCATGAGAAGTCAGAACATTCATCATCTTCAGTTATTGCTCTAGCAATCAAGGGTAACAAAAAAAGTGAATATGTGGTACAGTGGGCACTTAATAAGTTTGTTCCTGAGGGGATAATTATCTTCAAGCTCATTCATGTCCATGCTGGTATAAAAGGCGTTCCAACACCAATGGGAAATGTGATCCCTCTTTCGCAAGTGCGTAACGATATAGTTACTGCATTCAGAAATGAAGTGGAATGGCAGACGAATCGAATGCTTCTACCTTTTAAGAAATTATGTGAGCAGAGAAAGGTGCATGTAGATGTTGTAATACTTGAATCAGATGATGTTGCAACTGCAGTAGCAGAGGAAGTAGCTAAGGGTCCTACAACTAAACTTGTTGTTGGAGCTTCATCTAATGGCATATTTACAAGTAAACATAAAGGTTTGTCTGCAAAAGCCTCAATATGTACTCCAAGATTTTGTACAGTTTATGCTGTTTCAAAAAGAAAATTGTATACACGGCCGTCAGACATACAGATTGATGAAAGCATTATGCACGATGACTCTAGCGAAACCAGTTTTTTCTCCAACAGCTCATCAAATTTCACTTCCGCTTCTCAGATAGACTCTGGATCAATTGCATCATACACTCATATGCATTCCTCTTACCTATCAACACAGCAATTTCGAGCTCTTTCGCGTATAAATAAGACCCTTCCAAGTAAATCCTCTAGTATAACTAAAACCAACCATTCTAGAGGCCGATCTCTAGATATTGGAAGAGAAAATAAAGCTATGAGCTATGCCAGAAACTCTGATTATGCATGGAGTAGGGCCTCTAGTTGCAAAAGCATTATATCAGATCCTGGATCTTGGCTTTATGATCAAAATTTCACCAAGGATGTGCCATTAGCAACTGAACTTCCTTCGCGTAATAGGCAGGCCAATATTAACCTTGAACTGGAAAAGTTGAGAATTAAACTAAGACATGCCCAAGGAATGCATGTGGTAGCTCAGAGTGAGAACATTGATGCATCAAGAAAGGTAATATCTGTTTTGTTATGA 1065 0.384 IRMDSIHEKSEHSSSSVIALAIKGNKKSEYVVQWALNKFVPEGIIIFKLIHVHAGIKGVPTPMGNVIPLSQVRNDIVTAFRNEVEWQTNRMLLPFKKLCEQRKVHVDVVILESDDVATAVAEEVAKGPTTKLVVGASSNGIFTSKHKGLSAKASICTPRFCTVYAVSKRKLYTRPSDIQIDESIMHDDSSETSFFSNSSSNFTSASQIDSGSIASYTHMHSSYLSTQQFRALSRINKTLPSKSSSITKTNHSRGRSLDIGRENKAMSYARNSDYAWSRASSCKSIISDPGSWLYDQNFTKDVPLATELPSRNRQANINLELEKLRIKLRHAQGMHVVAQSENIDASRKVISVLL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0055 354 PANTHER OS02G0152300 PROTEIN 13 351 - -
Lal18g0055 354 CDD STK_N 17 168 - -
Lal18g0055 354 Gene3D HUPs 10 145 IPR014729 -
Lal18g0055 354 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 13 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0055 Lal-Chr18 438572 441074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0055 15 349 U-box Gene Family AT4G25160 37.565 5.75e-60 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0055 - - gsj:114409387 464.151