Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0046 ATGGATAAACCAGCCTTCATAAAAGGGAAGAAAAGAAGAAAAACCGATCCTGATGGGGTCGATGTTGTTGAGGACTTTGAAGTACTTTTTGGTGAAGTTAATGATTCTGGTGGTGAAAGTTTTAATCTTTTGTTTGGTAGAGAGGGTGAACAAGTTCAGGTGGGTGGATTTAGTGAAGGGTGTGGAAATCTAGGTGTGAATAGAGTTGGTTGTTTGGGTCAGCCATGGAGCAGTGAAGGTGCTTGTGAAAATGACCCTGTGACTCTTCCTCTTTTTGGAGGAGGATTACAAGAGCTTGGTGAAGCTGGTTTTTGCAATCTTAATGATCAGGGTTTCCATCCTCAAGAAAGGGGTTGTCAGGAAGATGATACAACTTCCATTGATAATAATAGGCCCAACATTCCAGCCCCATATGATGATGGTAATGGTCAGCATGATCCACACCAAGGATCAGTTAACAAGAAGACAGTTCCTGTAGTTGAAGAGGGGATGGAGCTATTAAATGGTGGAGCTGTCACTAATGAAGAGACAAGAGGTGAACCCTTGAGGCTGCAGGCTAAGAGAGGCCGGCCGAAGGGTTCCAAGAATAAGAGTAAGGGGTTGAAAGGTAACAATGTACACGCGTGTGCTGGAAATCCAGGAGGGTATGATAAATTTGCAGGTAAAAATGTTGGTAGCATAGAGGTTTGTGGGTTAAATCGCAGGTCTTCTCGGCACAAAGGATCAAATAGCAAGAAGACAGTTCTTGGAGTTGAAGAGGGAGGAAGTGTTTCCATCAACAAAGAGACCAAAAGTGAAGCCTTGAGGTCAGGAGTTAGGAGAGGCAGACCTAAGGGTTCCATTAATAAGAATAAACAGCTCAGCATGGCCCTGAATGGACAAAGTGTTAGTGGAAATGATAATGCAGGAACAGATGGGATGAGTCTTGTTACAAGCTTAAAGAATGAAAGATCAATTATCTTTTGTGAGAAAGATCAGGCGTTGCCTTCGGTCATGGGCACTAGTGATAAAGGTGCACAGCCAAGTGAGATTGCAAGCCCAAAGAAGCGTGGTCGACCAAAGGGTTCCAAAAATAGAAACAAAAAGATTGTATTTGTCAGTAATGCAACTGGAGTTAGAATTGCATGTTCAAAGAAGTGTGGTCAACCAAAGGTTTCAAAACATAAAAGAAATGATGTTGTGGATACTGGTAATGAAGTTGCTGGTGAGATTGCAATGCTAAAGATGCGTGATCGACCAAAAGGTTCAAAAAATAAAAAGAATGTTGTCCATGTTAATGATGAAATTGCAGAACCTAAGAAGCATTGTCGATCAAAGGCTTCAAAAAAGAAAAGGAAGACTTCTATGGGTGAGGTTAAAAATATCACTGTTGTTAATGATGGAAGGCAGGAAATGCCTATCCAAACCTTTGGCCATGATGAGGTTCAAAATGATAATAACTATGTTAAACCCAAGTGTGGTCGACACAAGGGATCTAAAAGTAAGAAAGTGAATAGTGTTGGTGAAGGAAAAGAGATAATATCTGGTGAAACCTCTGTTTCAAATGGAGTTCAATATTTGAAAGTCCAGTTCAAGGATGATGAACAGCTAAAATATGTGAAGGAAACTTGTTGTTTGACCACAGTTAGTCATGGAGCTTATAATGAAGAAGAGAGTGAGACTATTAGGTTGGCTGGGCCAGATGATGGGATCATTCCTCCTGAAGTTGAGGCAGATAAGGGTGGAACAAAGCTTGGCAGGCGGAAGGGTTCTGGTAGAAAAGAAAATGAGACTGTTAGGCCTTTGAATTCAGAGTCTGAGAGCCATGGTCTTGTAGCTGAGAAAGATGGAACTGCATCCTCCAGAAATGATATTGATCAACTTAAAGGTAATTATAGCCAAGAAATATGTTTAAGAATTACAAAACATACTATTAAACAAAGGCAATCAAGGGTTTTAAGAGAACAGGCAACAGTTCATGCTACTATCATAGATGAGAGTGTACCAATGGAAGTTTTACATAAATCTAACATGAATGTTACAGGACAAGCCTTAAAATGTCAGAAGAGTACTCGTTTTAGCAAAGTTCTGAGCAGGATTATGCCACTAAAGGATGTACAATATGAATGCATTTCAATGCTAGAAAGTCAAGCAAATAAGAAAATGCAGTCAGATGTTCACATTGAATGCTCAAAGGAGTCTAGATCGACATGTGAAATTGGCAATACTCAAAAGAGATCTAGTGAAAGAGTGAGAAAGTTGTTAGCCGAACACAAGAATTTTAAGGGTGTTGGAGGGGAAGAAACTGCATACCTTGAATTAGAATCTTCAGGTTTGACGGGTGACAGATGGAAAAAAGAGACAAAGGCTTTAATGTGTCACCAGTGCTGGCGAAATGATAGGAGTGTTGTCATTTGTTCAAAATGCAAAAGAAAGCGATATTGTTATGAGTGCATAACAAAATGGTACCCAGAGAAAACTAGGGAGGATATTGAGACTACTTGTCCCTTTTGTCTTGGTAATTGCAATTGCCGATTGTGCCTAAAGCAGAATATATCTGTGATGACTGGGAGTGGTGAAGCTGAGAAAGATGTCAAATTACAAAAGTTGTTTTACTTGCTTAACAAAACTTTGCCTTTACTCCAACATATCCAACAAGAGCAGAGATCAGAGTTGGAAGTAGAAGCTACAGTGCTTGCTTCCCAGTTGGTAGAAGAGGATATTATGCACTCGCTAATTGATGACGATGATCGAGTATATTGTGACAACTGCAATACATCCATTGTTAATTTCCACAGAAGCTGTCCCAATCCTAATTGTAGATATGATCTCTGTCTCACATGTTGCATGGAGCTAAGAAATGGACTTCATGGTGACGATATTTCCTCTAGTGCCAGTGAGAGAAAAGCTGATACACCATCTATAACTTCTGCTTGGAGAGCAGAGATAAATGGTAGAATTCCTTGCCCTCCAAAAGCTAGGGGAGGTTGTGGTTCTACTATCCTTTCACTCAGGCGCCTTTTTGAAGCTAATTGGGTTGATAAATTGATTAGTAATGTAGTGGAACTGATGACAAGATATCAGCCACCTATTGTTGATCCTTCTCTACGATGTTTAGTGTGCCATAGTTTTGACGTAGAGGCAACACAAAATTCTGTTAGAAAGGCAGCTTCCAGAGAAACCAGTCATGATAACCTTTTGTACTGCCCGGATGCTGTTAAAATTGGAGACACAGAATTTGAGCATTTTCAATGGCACTGGAGAAGAGGTGAACCTGCTGTAGTTAGGAATGTGTTGGAAAAGGGTAGTGGCCTCAGCTGGCACCCAATGGTGATGTGGAGAGCATTTAGGGGGGCAAAGAAGATATTGAAAGAGGAGGCAGCTACTTTTAATGCAATTGACTGCCTAGATTGGTGTCAGGTTGAAATTAATATCTTTCAGTTCTTCAAAGGGTACTTGGAAGGTCGTAGGTACAGAAACGGATGGCCGGAGATGCTGAAGCTAAAGGATTGGCCTCCATCAAATTCTTTTGAAGAGTGTCTGCCACGGCATGGTGCTGAGTTTATAGCTATGCTTCCCTTTAGTGACTATACCCATCCCAAATCTGGCATTTCAAATCTTGCGACGAAGCTCCCGGCTGTTTTGAAGCCAGATTTAGGCCCCAAGACATACATTGCTTATGGATCTTTGGAAGAACTGGGTAGAGGTGATTCTGTGACAAAACTACACTGTGATATTTCAGATGCAGTTCTTCATGTCTGGGTTCCTGGTTGGTTCCGTTCCTTCGAGTGCCAAGCAAGGTGGTATGGTGGATCTGCTTCAGGTCCTCCTCTTCCAACAGCGGAGTGTGGGGTTGTTACACTCCAACACCCAAATAAGTGTTTTGAGGGAGAAAATAGGAAGATCCTTTTGCCTGGTCGGTCAGGCTTCATTGGGGCAGTTGCTAATTCCACTGGAGTCATTCTATGCGTTGATCAGGTCAATATTCTGACACACACAGCTGAAGTGAAGACGCCACCATGGCAACACAGAATAAAAAAGAAGTTACAGGAAAAATATGAAGATGAAGATATGTGTGAGCTCTATGGCAGAGACAATAAGGCAGTTGGTTCAAGTAGAAGAAAACAAAGAAAGCCTCACCTAGATATTGGGATGGATCCTAAAGTCCTTGAAAAGGAAAAAACTATTAGTAGAGAGTCTACTTTACTAGGAAGTCAAACAACAGAAGAGAAACTTAGTGAACAGCAGAGTAGATCCATGAGTTCTGAATCAAAAATCAGGTGTATGCATTTTGAGAAGTCACCCTCCTGCACTGGGAAGAATGTTTCTGATTTACATTTCCCTCAGAAGCAACTTTCATTTCTTCAATATCATTCTGTTTGTGGAAATGTGGGTGACAGTTATAGCTTATTGGAAGATGGGACAGATACACATTGTGACTTCCCTCTTGATGAATCTTATAGACAAGATCATGGTGATGATGTTGAAAGATATCCAAACACCACTGAATGTAATCAACCTTGTATTGGAGCCGAAGAAACAACATTCGTCAATGGGTTGAATTGTTCAGTCATGCCATGTTCAGAAATCAAGACTGGCAATGTAGAGTCACTTGAAAATAACACATCAAATAAAAATTTCTTTCAAAATGATGACCATTTGGAGACTCAACATGGGAGTGCTGTGTGGGACATATTCCGTAAGCAGGATGTACCCAAGCTAATGGAATACCTAAAGAAACACCAAAAAGAATTTCGCCACGTAAATAATCTACCAGTGAATTCTGTGATTCATCCCATTCATGACCAGATCCTTTATTTAAATGAGAAGCATAAAAAGCAACTAAAGCAAGAATTTGGTATTGAACCGTGGACGTTCGAGCAACACCTTGGGGAGGCTGTTTTCATACCTGCAGGATGCCCACATCAAGTGAGAAATAGAAAGTCTTGCATAAAGGTGGCCCTGGACTTTGTTTCACCTGAGAATGTTCAAGAATGCATTCGACTGACCGAGGAATTTCGATTGCTTCCAAAAAACCATAGATCTAAGGAAGATAAATTGGAGATAAAGAAGATGGCATTATATGCTGCAGATGTTGCTATAACTGAAGCCACTGAACTGATTGGAGGAAAATAA 5115 0.4072 MDKPAFIKGKKRRKTDPDGVDVVEDFEVLFGEVNDSGGESFNLLFGREGEQVQVGGFSEGCGNLGVNRVGCLGQPWSSEGACENDPVTLPLFGGGLQELGEAGFCNLNDQGFHPQERGCQEDDTTSIDNNRPNIPAPYDDGNGQHDPHQGSVNKKTVPVVEEGMELLNGGAVTNEETRGEPLRLQAKRGRPKGSKNKSKGLKGNNVHACAGNPGGYDKFAGKNVGSIEVCGLNRRSSRHKGSNSKKTVLGVEEGGSVSINKETKSEALRSGVRRGRPKGSINKNKQLSMALNGQSVSGNDNAGTDGMSLVTSLKNERSIIFCEKDQALPSVMGTSDKGAQPSEIASPKKRGRPKGSKNRNKKIVFVSNATGVRIACSKKCGQPKVSKHKRNDVVDTGNEVAGEIAMLKMRDRPKGSKNKKNVVHVNDEIAEPKKHCRSKASKKKRKTSMGEVKNITVVNDGRQEMPIQTFGHDEVQNDNNYVKPKCGRHKGSKSKKVNSVGEGKEIISGETSVSNGVQYLKVQFKDDEQLKYVKETCCLTTVSHGAYNEEESETIRLAGPDDGIIPPEVEADKGGTKLGRRKGSGRKENETVRPLNSESESHGLVAEKDGTASSRNDIDQLKGNYSQEICLRITKHTIKQRQSRVLREQATVHATIIDESVPMEVLHKSNMNVTGQALKCQKSTRFSKVLSRIMPLKDVQYECISMLESQANKKMQSDVHIECSKESRSTCEIGNTQKRSSERVRKLLAEHKNFKGVGGEETAYLELESSGLTGDRWKKETKALMCHQCWRNDRSVVICSKCKRKRYCYECITKWYPEKTREDIETTCPFCLGNCNCRLCLKQNISVMTGSGEAEKDVKLQKLFYLLNKTLPLLQHIQQEQRSELEVEATVLASQLVEEDIMHSLIDDDDRVYCDNCNTSIVNFHRSCPNPNCRYDLCLTCCMELRNGLHGDDISSSASERKADTPSITSAWRAEINGRIPCPPKARGGCGSTILSLRRLFEANWVDKLISNVVELMTRYQPPIVDPSLRCLVCHSFDVEATQNSVRKAASRETSHDNLLYCPDAVKIGDTEFEHFQWHWRRGEPAVVRNVLEKGSGLSWHPMVMWRAFRGAKKILKEEAATFNAIDCLDWCQVEINIFQFFKGYLEGRRYRNGWPEMLKLKDWPPSNSFEECLPRHGAEFIAMLPFSDYTHPKSGISNLATKLPAVLKPDLGPKTYIAYGSLEELGRGDSVTKLHCDISDAVLHVWVPGWFRSFECQARWYGGSASGPPLPTAECGVVTLQHPNKCFEGENRKILLPGRSGFIGAVANSTGVILCVDQVNILTHTAEVKTPPWQHRIKKKLQEKYEDEDMCELYGRDNKAVGSSRRKQRKPHLDIGMDPKVLEKEKTISRESTLLGSQTTEEKLSEQQSRSMSSESKIRCMHFEKSPSCTGKNVSDLHFPQKQLSFLQYHSVCGNVGDSYSLLEDGTDTHCDFPLDESYRQDHGDDVERYPNTTECNQPCIGAEETTFVNGLNCSVMPCSEIKTGNVESLENNTSNKNFFQNDDHLETQHGSAVWDIFRKQDVPKLMEYLKKHQKEFRHVNNLPVNSVIHPIHDQILYLNEKHKKQLKQEFGIEPWTFEQHLGEAVFIPAGCPHQVRNRKSCIKVALDFVSPENVQECIRLTEEFRLLPKNHRSKEDKLEIKKMALYAADVAITEATELIGGK 1704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0046 1704 MobiDBLite consensus disorder prediction 573 595 - -
Lal18g0046 1704 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 178 960 IPR045109 GO:0032454|GO:0033169
Lal18g0046 1704 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 1318 1702 IPR045109 GO:0032454|GO:0033169
Lal18g0046 1704 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 962 1243 IPR045109 GO:0032454|GO:0033169
Lal18g0046 1704 ProSiteProfiles JmjC domain profile. 1181 1667 IPR003347 -
Lal18g0046 1704 PANTHER ENBP1 PROTEIN 1318 1702 - -
Lal18g0046 1704 PANTHER ENBP1 PROTEIN 178 960 - -
Lal18g0046 1704 PANTHER ENBP1 PROTEIN 962 1243 - -
Lal18g0046 1704 SUPERFAMILY Clavaminate synthase-like 1072 1693 - -
Lal18g0046 1704 MobiDBLite consensus disorder prediction 330 361 - -
Lal18g0046 1704 MobiDBLite consensus disorder prediction 260 282 - -
Lal18g0046 1704 SMART cupin_9 1174 1667 IPR003347 -
Lal18g0046 1704 MobiDBLite consensus disorder prediction 1393 1417 - -
Lal18g0046 1704 ProSiteProfiles Zinc finger RING-type profile. 786 831 IPR001841 -
Lal18g0046 1704 MobiDBLite consensus disorder prediction 170 206 - -
Lal18g0046 1704 CDD cupin_RmlC-like 1591 1651 - -
Lal18g0046 1704 Pfam JmjC domain, hydroxylase 1546 1650 IPR003347 -
Lal18g0046 1704 Gene3D Cupin 1055 1248 - -
Lal18g0046 1704 Gene3D Cupin 1513 1676 - -
Lal18g0046 1704 MobiDBLite consensus disorder prediction 115 152 - -
Lal18g0046 1704 MobiDBLite consensus disorder prediction 558 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0046 Lal-Chr18 332361 341201 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lal18g0046 JmjC 4.2e-18 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0046 K15601 - gsj:114384813 1140.56