Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0041 ATGTCTGCACTTAACACTTCGTCATTTTCCGGTGAAACCCGAACCGTGTGTGTCACCGGAGCTGGTGGATTCATAGCTTCTTGGATTGTCAAACTTCTCTTACAGAAACGCTACACTGTTAGAGGAACCCTAAGAAACCCAGATGGCCGAAAGAATCAGCACTTGAAAGAATTGGAAGGAGCAAAGGAGAGGCTAACTCTACATAAAATTGATCTCATTGATCTTCACTCTCTTAAAGCTGTTTTTGAAGGGTGTGATGGTGTCTTCCACACTGCCTCTCCCATGACTAACAATCCTGAAGAGATGTTAAAGCCGGCGATGAATGGGAGCAGGAATGTGATAATAGCAGCTGCAGAAGCAAAAGTGCGGCGCGTGGTTTTCACTTCATCAATTGGTGCAGTATATATGGATCCCAGTAGAAGTAGAGATTTGGTGGTTGATGAGTCATGCTGGAGTGACTTGGAATACTGCAAGAACACCAAGAACTGGTATTGTTATGGGAAAGTTGTGGCAGAACAAACAGCATGGAATGTAGCAAGAGAGAAAAGAGTAGACTTGGTTGTGGTGATCCCAGTTATAGTTATTGGACCATTACTACAATCCACCATCAATGGTAGCATATTTCATATACTCAAGTACCTCAATGGCTCTACCCAGACATATGTTAATGCCACTAATGGTTATGTGCATGTTAAGGATGTCGCATTAGCACACATTTTTGTTTATGAGACACCCTCTTGTTCTGGAAGATACATATGTTCTGAAAGTTCTTTACATCGTGGTGACCTAGTTGAGATTCTGGCTAAGCTTTTCCCTCAATATCCAATTCCTACCAAATGTTCAGATGAAAAGAACCCAAGGGTAAAACCCTACCTCTTTTCAAATGAAAAGCTAAAAGATTTGGGAATGAAGTATACTCCAGTGAAGGAGGGTCTATATGACACTGTTACGAGCCTACAAGAGAAAGGCCACCTTCCCTTTCTGACTGGATCTAGACTTTAA 1002 0.4202 MSALNTSSFSGETRTVCVTGAGGFIASWIVKLLLQKRYTVRGTLRNPDGRKNQHLKELEGAKERLTLHKIDLIDLHSLKAVFEGCDGVFHTASPMTNNPEEMLKPAMNGSRNVIIAAAEAKVRRVVFTSSIGAVYMDPSRSRDLVVDESCWSDLEYCKNTKNWYCYGKVVAEQTAWNVAREKRVDLVVVIPVIVIGPLLQSTINGSIFHILKYLNGSTQTYVNATNGYVHVKDVALAHIFVYETPSCSGRYICSESSLHRGDLVEILAKLFPQYPIPTKCSDEKNPRVKPYLFSNEKLKDLGMKYTPVKEGLYDTVTSLQEKGHLPFLTGSRL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0041 333 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 10 328 - -
Lal18g0041 333 CDD FR_SDR_e 16 302 - -
Lal18g0041 333 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 328 - -
Lal18g0041 333 Gene3D - 14 331 - -
Lal18g0041 333 Pfam NAD dependent epimerase/dehydratase family 16 245 IPR001509 -
Lal18g0041 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 319 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0041 Lal-Chr18 283674 290273 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0041 12 279 Monolignol Biosynthesis Gene Families AT1G80820 67.910 5.95e-134 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0041 K09753 - gmx:100811528 509.22