Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0037 ATGTCTTTGAAGATAGTGGTTGTAAGAGAGTATGATGAAGATGAACACAAAGTGGCATTAGAGAAAATGGAGAAGCTTTGTGAAGTTGGGCAGAGAGGAAAACCATCACTTATCACTGACCTTATGGGAGACCCTATTTGCCGAATCCGTCACTTTCCGTTACATGTCATGCTGGTTGCAGAATATGGAGAAGGAGAAGTTGTTGGAGTAATAAGAGGGTGTGTAAAAACAGTTACAAGAGGGAATTCAGTTTATGTAAAGTTGGCTTATCTTTTGGGCCTAAGGGTCTCCCCACAACATAGGAGATCTGGTATTGGCACAAAACTAGTTGAACATTTAGAAGAATGGTGCAAGCAAAAGGGTGCAAAGTATGCATACATGGCAACTGATTGTACAAATGAGGCTTCAATCAATTTATTCACAAAGAAATGTGGCTACTTGAAGTTCAGGGCTCTAACAATGCTAGTGCAACCTGTTTATGCTCATTACAACCCAATAAACTCCAATCTTGCAATTCTTCACATTCCACCATCCCTTGCAGGGTTCATGTATAACCATATGTTTTCTAATAATTCAGAATTTTTCCCTAGAGACATAGATTTAATTTTATCAAACAAGCTGAATTTGGGCACATTCATGGCCATACCAAGGAAGTATCTCTCCAAATGTGACCTAAGAAGGGGCATTTACCCTCCAAGTTATGCAATATTAAGTGTTTGGAACACCAAAGAAGTGTTCAAATTGCAAGTTAAAGGGGTGTCACCATTAGCACATGCATGTTGTGTAGGTACAAGGATATTGGATGAATGGATGCCATGGCTAAGGGTACCTTCATTTCCTGATATATTTAGGCCATTTGGGGTGTATTTTCTATATGGACTACACATGGAAGGTGAGTATGGTACACAACTCATGAAATATCTATGTGGGTTTGTGCATAATATGGCTAGAGATGAGGGTGGTTGTGGGGCCATTGTGGCTGAATTGGGACAAAGGGACCCAGTTAGAGAAGCAGTCCCACATTGGAGTAAGTTCTCATGGGATGAAGACATGTGGTGCATTAAGAATCTTCATGACTCAAACCATGTTATGTCATCTCATCATTGCTTCTCTTCTAGATCCTCTTCACCAGTCATTTTTGTTGATCCTAGAGATTTTTGA 1161 0.3997 MSLKIVVVREYDEDEHKVALEKMEKLCEVGQRGKPSLITDLMGDPICRIRHFPLHVMLVAEYGEGEVVGVIRGCVKTVTRGNSVYVKLAYLLGLRVSPQHRRSGIGTKLVEHLEEWCKQKGAKYAYMATDCTNEASINLFTKKCGYLKFRALTMLVQPVYAHYNPINSNLAILHIPPSLAGFMYNHMFSNNSEFFPRDIDLILSNKLNLGTFMAIPRKYLSKCDLRRGIYPPSYAILSVWNTKEVFKLQVKGVSPLAHACCVGTRILDEWMPWLRVPSFPDIFRPFGVYFLYGLHMEGEYGTQLMKYLCGFVHNMARDEGGCGAIVAELGQRDPVREAVPHWSKFSWDEDMWCIKNLHDSNHVMSSHHCFSSRSSSPVIFVDPRDF 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0037 386 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 176 IPR000182 GO:0016407
Lal18g0037 386 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 52 149 IPR016181 -
Lal18g0037 386 PANTHER N-ACETYLTRANSFERASE 4 386 - -
Lal18g0037 386 Gene3D - 4 150 - -
Lal18g0037 386 CDD NAT_SF 57 126 - -
Lal18g0037 386 Pfam Acetyltransferase (GNAT) family 51 146 IPR000182 GO:0016407
Lal18g0037 386 PANTHER OS12G0561600 PROTEIN 4 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0037 Lal-Chr18 257518 260735 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lal18g0037 Acetyltransf_1 1.4e-19 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0037 - - gmx:100799977 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1254 20 17061319 17064274 Lal18g0037 18 257518 260735 LSH