Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0030 ATGGGGATATACCTTAGCACTCCGAAAACAGAGAAGGCTTCTGAAGATGGTGAGAATGACAAACTTCGATTTGGTCTCTCTTCCATGCAGGGTTGGCGTGCTTCCATGGAAGATGCTCATGCAGCTCATCCATATTTGGATGAATCGACATCTTTCTTTGGTGTTTTTGATGGCCATGGAGGCAAAGCAGTTTCGAAGTTCTGTGCCAAGTATCTACACCAGCAAGTGCTCAAGCATGAAGCTTACATAGCGGGAGATCTTGGAACATCTTTACAGAAATCTTTCCTCAGAATGGATGAGATGATGCTTGGACAAAGGGGGTGGAGAGAATTAGCAGTTTTGGGAGATAAAATGGAAAAGTTGTCTGGTATGCTGGAGGGTTTTATATGGTCTCCCAAGGGTGGTGAAGCCAATGATCGTGTCGATGACTGGGCTTTTGAGGAGGGACCCCATTCTGATTTCAGTGGACCAAACTGTGGAAGCACAGCTTGTGTGGCTATCATTCAAGGAAATAAACTTGTTGTTGCAAATGCTGGTGATTCTAGATGTGTATTGTCACGGAAGGGCCAGTGGTTCCGTTCGATACATGTGGATTGTGGACGACACCTACAGGGGAAGGCTTTGTTTGTTCTACCTTCTGAGATAGCTAACTTGCACCCTAATTACAGTTTGCATCCATCCAGAGCCGCTTCCATCTCTGTTACCACACACAATACTTGTACAATTAACTGCATGGCACAGCTACTAGTCAGAAACCCTTGTATGGCACACAATTTGTCCAAAGATCACAAGCCTGACCTTGAGGCTGAGAAAGACAGGATTCTAAAAGCTGGTGGATTCATCCAAGTTGGACGGGTCAATGGAAGTATAAACTTGACTAGAGCAATTGGAGACATGGAATTCAAGCAGAATAAGTTTCTGCCTGTTGAAAAGCAGATTGTGACTGCTGATCCAGACATAACTTCTGTTGAGCTTTGTGATGATGATGAATTTCTTGAAGATAAACTTTCAGCGGTTTGTGAGAAAGTATTTGAGAGGTGCTTGGCACCAACAGCTGGTGGTGAGGGATGTGATAACATGACCATGATCTTGATTCAGTTCAAGAATCCTTCCAATCCCAGTGCTCCTGTCACAAACCAGCCTCAGTCATCTGCCGAATCTTCTGAAGCTGATAATAAAATTGCAGAGAAAACTGAACAAAACTGA 1206 0.4403 MGIYLSTPKTEKASEDGENDKLRFGLSSMQGWRASMEDAHAAHPYLDESTSFFGVFDGHGGKAVSKFCAKYLHQQVLKHEAYIAGDLGTSLQKSFLRMDEMMLGQRGWRELAVLGDKMEKLSGMLEGFIWSPKGGEANDRVDDWAFEEGPHSDFSGPNCGSTACVAIIQGNKLVVANAGDSRCVLSRKGQWFRSIHVDCGRHLQGKALFVLPSEIANLHPNYSLHPSRAASISVTTHNTCTINCMAQLLVRNPCMAHNLSKDHKPDLEAEKDRILKAGGFIQVGRVNGSINLTRAIGDMEFKQNKFLPVEKQIVTADPDITSVELCDDDEFLEDKLSAVCEKVFERCLAPTAGGEGCDNMTMILIQFKNPSNPSAPVTNQPQSSAESSEADNKIAEKTEQN 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0030 401 MobiDBLite consensus disorder prediction 368 389 - -
Lal18g0030 401 Gene3D - 1 368 IPR036457 -
Lal18g0030 401 SUPERFAMILY PP2C-like 3 370 IPR036457 -
Lal18g0030 401 CDD PP2Cc 23 367 IPR001932 -
Lal18g0030 401 ProSiteProfiles PPM-type phosphatase domain profile. 23 367 IPR001932 -
Lal18g0030 401 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 192 - -
Lal18g0030 401 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 332 379 - -
Lal18g0030 401 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 239 332 - -
Lal18g0030 401 MobiDBLite consensus disorder prediction 368 401 - -
Lal18g0030 401 PANTHER PROTEIN PHOSPHATASE 2C 239 332 IPR015655 GO:0004722|GO:0006470
Lal18g0030 401 PANTHER PROTEIN PHOSPHATASE 2C 332 379 IPR015655 GO:0004722|GO:0006470
Lal18g0030 401 PANTHER PROTEIN PHOSPHATASE 2C 1 192 IPR015655 GO:0004722|GO:0006470
Lal18g0030 401 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Lal18g0030 401 Pfam Protein phosphatase 2C 155 190 IPR001932 -
Lal18g0030 401 Pfam Protein phosphatase 2C 23 102 IPR001932 -
Lal18g0030 401 Pfam Protein phosphatase 2C 249 332 IPR001932 -
Lal18g0030 401 SMART PP2C_4 13 365 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0030 Lal-Chr18 203030 209495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0030 1 374 PP2C-type Phosphatase Gene Family AT2G25070 56.359 3.88e-149 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0030 K17499 - twl:120005848 489.189