Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0028 ATGGATCTTGATGTCATGTATGGAGATTTAATGGAGAAGTACGAGAAGCTAGAGAAGGTTGGAGAAGGAACATATGGAAAAGTGTACAAAGCAGTGGAGAAGGCCACAGGGCAGGTTGTTGCATTGAAGAAGACTCGGTTGGAGATGGACGAGGAAGGAATACCTCCAACCGCTCTGCGAGAAGTGTCTCTTCTTCAGTTGCTATCCCAATCAATTTACATTGTCCGGCTTCTCTCTGTTGAGCACATCGACAAAGTCCCCAAGGCCTCAGCACCTTCTGCTCAAACTAAGCCCATCCTCTACCTTGTGTTCGAGTACCTTGACACTGACCTCAAGAAGTTCATTGACTCGCACCGCAAGGGCCCCAACCCAAGGCCACTTCCACCTTCCCTTATTCAGAGTTTCCTGTTCCAGCTTTGCAAAGGGGTGGCCCACTGCCATAGCCATGGTGTCCTTCACCGCGACCTCAAGCCTCAGAATCTCCTTCTTGATCAGCAGAAAGGGATACTCAAGATCGCCGACCTTGGTCTTGGACGAGCCTTCACTGTCCCTCTCAAGAGCTACACTCATGAGATTGTCACTCTCTGGTACAGGGCACCTGAGGTTCTGTTGGGATGTACCCATTATTCCACTGGGGTTGACATGTGGTCTGTTGGATGCATCTTTGCTGAAATGGTGCGAAGGCAAGCTTTGTTTCCAGGGGATTCTGAGTTCCAACAGCTCCTTAGCATATTCAAGATTTTGGGAACACCAACTGAGGAGCAATGGCCTGGAGTTACTTCTCTGCGTGATTGGCATGTCTACCCACGGTGGGAACCTCAGAACTTAGCTAGGGCTGTGCCGTCCTTAGGACCTGATGGAGTAGACCTTCTCACGAAAATGCTTAAGTATAATCCTTCTGAGAGAATCTCTGCCAAGGTAGCACTTGATCATCCCTACTTTGACAGTCTTGACAAGTGTCAATTTTGA 969 0.4892 MDLDVMYGDLMEKYEKLEKVGEGTYGKVYKAVEKATGQVVALKKTRLEMDEEGIPPTALREVSLLQLLSQSIYIVRLLSVEHIDKVPKASAPSAQTKPILYLVFEYLDTDLKKFIDSHRKGPNPRPLPPSLIQSFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDQQKGILKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGCTHYSTGVDMWSVGCIFAEMVRRQALFPGDSEFQQLLSIFKILGTPTEEQWPGVTSLRDWHVYPRWEPQNLARAVPSLGPDGVDLLTKMLKYNPSERISAKVALDHPYFDSLDKCQF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0028 322 Pfam Protein kinase domain 14 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0028 322 SMART serkin_6 14 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0028 322 Gene3D Transferase(Phosphotransferase) domain 1 110 321 - -
Lal18g0028 322 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Lal18g0028 322 SUPERFAMILY Protein kinase-like (PK-like) 6 317 IPR011009 -
Lal18g0028 322 PANTHER CELL DIVISION PROTEIN KINASE 11 322 - -
Lal18g0028 322 ProSiteProfiles Protein kinase domain profile. 14 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0028 322 Gene3D Phosphorylase Kinase; domain 1 2 108 - -
Lal18g0028 322 PANTHER CYCLIN-DEPENDENT KINASE B1-2 11 322 - -
Lal18g0028 322 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0028 Lal-Chr18 192749 196240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0028 11 322 Core Cell Cycle Gene Families AT3G54180 83.974 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lal18g0028 Pkinase 5.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0028 K07760 - gmx:100805119 573.933