Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0012 ATGCACATATTCCAGTCTGACAGGTTACCTAATCAAGCTGGGTCTCAGTTGCCTGGGCTGACCCAACTAACTGGGAATGCCCTCCCTCCCCAAATGTCTAACTTATATGGTCTACCGCGTTCCTCAATCAATATGGACCCTGAATTTCTTATGGCGCGCTCATCTATGCAAGAGAGGATCTGTGATATTTTATTGCAACGACAACCAGAACCAGTTACAGAAGTACAGAGAAGGAAAGTTAGGGATCTTGCAAAACGCCTTGAGGAGGGCATGTTAAAATCTGCTCGCTCTAAGGAGGACTACATGAACTTGGAGACACTTGAGACTCGTTTATCTAATTTCCTCAGACGGGCATCGATGAATAATCACAATCAACAGTATCCACAGCTCGCTGGCTCTTCCCCAATTGGTACAATGATACCAACTCCTGGTATGTTGCATGTTCTGAATTCAAGCATGGTGGTTACATCTTCTATGGATACCTCAATGATTGCTGCCACCAGGTGTAATAGCTTAGTATCTACATCTTTCAACAGTGTAAGCATGTTACCAGCTGGTGGCATGTTTGGCAGTTCATTAAATAGATCTGACTGTTTGTCTAATGGTTATCAGCAGTCTACTGCCAGTTTTTCTATTGGATCGGGGACAAACATGTCATCAATAGGGGTGCATAGAACTGGAAGCCAGATGATTCCCACTCCTAGATTTAATGTCAGCAGTAATCACTCAAATATGACTATGGATTCTTCTACTAACAGCAGTGCCTTTTCCGGTGTAGATTCTACGATGGTACCACAGACACAGCTGCAGCAGCAGAAGCAGCATATTGGTGGCCAAAATAGTCATGTATTGCAGAACCTTGGCAGACAAATGGGTAATGGAATGAGATCTGGTTTACTGCAAAAATCCTTTGCAAACTCAAATGGTGCTATAAACGGTGGGTTAGGCTTGATTGGGAACAACACAGCAAATGAACCCAGCACTTCTGATGGCTATGCTTCAACTTATGCTAATTCCCCTAAACACTTACAGCAGCACTTTGATCAAAATCAGCAAACAGTTGTGCATGATGATGGATATGGATCAAATAATGTTGACACTTTTGCTTCTGGAAATTTTTATGCTTCTGCGACATCCTCTGGCTCTACAATGAACACTCAGAACATGAATTCAGTTAAATTGCCATCAATTCCCAAGACTAGCTCACTGATAGGTGGTCACTCGAATTTGCACGGTATGCAGCAGGCTCCTCATATAAAGTCTGAAGCAGTTAATCAGTCCGAAAAGTTGAATTTTCAGCCTTCATTGATTTCAAGAGAAGGCCTTCTGCATTCACAACAGCAATATCAGCAAAGGCCCCAACAATTTCAACAGCCAGAGCAGTATGCACAGCAGCAATTTCAACTGAAGCAGCAAAATCAACAACCTCAACATTTGGTCAATAATGATACTTTCATTCCATCTCAGATAGTTGCTAATTTAGAAAGCCGAGTGAAGTCTGAGCCTGGAGTTGAACACCATAAAGAGGTGCTCAATTCTCATGTTTCTGAACAGTTCCATATGTCTGAGATGCAGAGCCAGTTCCAGCAGAACATGTCTGAAGATTGCTCTGGGGGTGGTCAACATCGTTCTTTTCCATCTGGTCAGCATGATATAACCTTTTCAACACCTCAAAATTCACAACAAATGTTGCACCCGGACCACCAATTGGTTGCAGAATCTCAAAATAGTTTTAGCTCTCTTACCATTGGGGCACAATCCAAATCAGTTGTTCCAAACCAATGGCCTCAATCTCAAGATGGTAACCACATACCTGGGAATATTTCACGTGACCAACATCTTCAAATGGATTTTCATCAAAGAATATCAGGCCAAGATGAAGCTCAATGCAATAACTTATCATCAGATGGATCTATTATTGGTCAAGCTGCTGCTTCTAGAGGCTCAATTGAGCTGTTAGATTCGGGCAGTGCTATCAAAAAGGCGCACAAAAATCAACAGAGATGGCTTTTATTTCTACTCCATGCTCGACGATGTTCTGCTCCCGAAGGGCGATGCCAAGAACGCTTTTGTTCTCTTGCGCAAAAGTTATGTAAGCACATAGATGGATGCACCCTGCGTCATTGTCCATATCCTCGTTGTCATCATACTAGAGTATTGCTTCATCATTTCATAAACTGCAAGGATCCATGTTGCCCCGTTTGTGTTTTTGTAAGAAATTATCGACGTGCATTTCAACTCAAGCATCAGATTCGGCCAGAAGCTGAATCAAGTTTGCCAATTGCAGTAAATGGATCCTGTAAATCATACAATATTGTAAGTTCATCGCCAAGATTGATCTCAAAGCCTCCAGTAGTTGTTGAAACTTCAGAATACCCGCATCCATCTCTCAAACGCGTAAAGGTTGACCACATCACGCAGTCTGATCATCCTGAAAATGACAACCGTGCTTCATCTGTTTCTGCAAATTGTGAATCACATCTTGCCAGGGATGCTCAGTCCCAAGCCTATCCTAGTGTTGAGATGCCTATCTCAATTAAACCTGAACTTATGGAAGCTAAGGCAGAAGTTCCAGCACATTTGGTACACGAGAAGCTTAGTGAAATGGAAATAGATAACAATAATGCAGATGATAAAATGCCTGGTGGTGAACGTGTCACATACGTTGAACCTCCTAATTTAGCTAGGACAGAAAGCACTAAAACTGAGAAGGAGACGGGACAAGGAAAACAAGAAAATGTGATACCGCCTTCTGAAAATGCAGCTGGAACCAAATCAGGTAAGCCAAAAATAAAGGGGGTCTCACTTACTGAATTATTTACTCCAGAGCAAGTCAGGGAACATATCACTGGCCTCAGGCAGTGGGTTGGCCAAAGCAAATCAAAAGTAGAGAAGAATCAAGCACTGGAGCACTCGATGAGTGAGAACTCCTGTCAATTGTGTGCTGTTGAGAAGCTTACTTTTGAACCCCCACCTATTTACTGCACAACTTGTGGTGTCCGCATTAAACGAAATAATATGTATTACACCATGGGTGCTGGTGATACACGGCATTATTTTTGTATTCCATGCTATAATGATGCTCGTTCAGAGAACATTAATGTTGATGGGACTCCCATTCCCAAGTCAAGATTGGAAAAGAAGAAGAATGATGAGGAAACTGAAGAATGGTGGGTTCAATGTGATAAATGTGAAGCTTGGCAACACCAAATTTGTGCATTATTTAATGGTAGAAGAAATGATGGTGGGCAAGCTGAATACACTTGCCCTAACTGCTACATTGAAGAGGTCGAAAGAGGAGAGCGCAAACCCTTACCCCAAAGTGCTGTTCTTGGAGCGAAGGATTTGCCAAAAACTATTCTCAGTGACCAGATAGAACAACGATTATTTAGACGACTGAGGCAAGAAAGGCAAGAGAGGGCAAGGGTTCAAGGGAAAAGTTATGATGAGGTGCCTGGAGCTGATTCCCTTGTTGTAAGGGTTGTTTCATCTGTTGACAAGAAGTTAGAAGTGAAACAGCGGTTTTTGGAGATTTTTCAAGAAGAAAATTACCCAACAGAATTCCCATACAAATCCAAGGTAGTTTTGTTGTTTCAGAAAATTGAAGGTGTGGAAGTCTGCCTATTTGGCATGTATGTTCAAGAATTTGGATCTGAAGCTGAATTTCCCAATCAGCGCCGGGTGTATCTTTCATATCTGGACAGCGTGAAGTATTTTAGGCCTGAAGTTAGAGCAGTGACTGGAGAGGCTCTCCGGACATTTGTTTATCATGAAATCCTGATTGGATACCTTGAATATTGCAAGAAGCGTGGTTTTACTAGCTGCTATATATGGGCATGTCCTCCGTTGAAGGGTGAAGACTATATCTTATATTGTCATCCGGAAATTCAGAAAACACCAAAATCTGATAAGCTTCGGGAGTGGTATCTGGCCATGTTAAGAAAAGCTGCGAAGGAGAATGTTGTGGCCGATCTAACCAACTTATACGATCATTTCTTTGTATCTACTGGGGAATGTAGGGCTAAGGTTACAGCTGCAAGACTTCCATATTTTGATGGAGACTACTGGCCTGGGGCTGCAGAGGATTTGATTTATCAGCTTCGCCAAGAGGAAGATGGAAGAAAACAAAATAAGAAAGGAACAACTAAGAAGACTATAACAAAAAGGGCTTTAAAAGCGTCTGGTCATTCAGACCTTTCTGGAAATGCTTCAAAAGATCTTATCCTTATGCACAAACTTGGTGAAACCATTAGTCCAATGAAGGAAGATTTTATTATGGTTCATTTGCAGCATGCATGCACCCACTGTTGTATTCTAATGGTGTCTGGAAACCGTTGGGTTTGCAACCAGTGCAAAAATTTTCAGATTTGTGATAAGTGTTATGAAGCAGAAATAAAGCGTGAGGAGAGAGAAAGACATCCTATTAATCAGAGGGAAAAACATTCCCTTCATCGGGTTGAAATTACTGATATACCAGTTGACACAAAGGACAAAGATGATATTCTTGAGAGTGAATTCTTTGACACTAGACAAGCATTTCTGAGTCTCTGTCAGGGAAACCATTATCAGTATGATACACTAAGGCGGGCTAAGCATTCCTCGATGATGGTCCTCTATCATCTTCATAATCCAACTGCTCCTGCATTTGTTGCAACTTGTAATATATGCTGTCTTGATATAGAAACTGGCCAAGGTTGGCGTTGTGAAGTTTGCCCTGAGTATGATGTATGCAATGGCTGTTACCAAAAGGACGGAGGCATTGATCATCCTCATAAGTTGACAAATCATCCATCAATTGCAGATCGTGATGCTCAGAACAAAGAAGCAAGAGAGGTTCGAGTGTTGCAGTATTTATGCACCACAGGTAGGGCAAGAGTAACATCACAAGATAAAATTTTGGGAGGATTTGGAAGGCGTAGTCCAAGGAACATATTTAGGAGAAATGATTTTCATAGGAGCGATCTTAATAGGCTCTTAGGATGGGACATTTGTGGGTTTGAAGGTTTTCATGAGTGTAATGAGATAGTGAAAGCAAATATGGAAGGCAAGATTATTCCAGATGAAGGTACCAAGAGGGGGAAAAGAAATGTCTACATGCTCGCAAAGGGTAGGAAAATAAACACAGGAAACTTGAACCAAGTGGAACACATTGAAGATGAAGATGGAAAAGTCTTGAGACCTGGTTTGGAGTTGAACCCGCTTGTTGCAGACTCAGACGGTGCTCGCCTGCATGATTTGGATGGTACAGTCCACTTTACACGATTCCAGCTACGAAAAATGCTTGATCTACTTGTGCATGCATCCCAATGTCGTTCTGCACATTGCCAATATCCAAATTGTCGCAAGGTAAAGGGCCTTTTCCGCCATGGGATGCACTGCAAAACTCGAGCTTCGGGAGGTTGTGTTCTTTGCAAGAAGATGTGGTATTTGCTTCAACTTCATGCTCGTGCATGCAAAGAATCTCAGTGCCACGTACCACGTTGCAGAGATTTAAAAGAACATTTAAGGAGGTTACAGCAACAATCTGATTCACGGCGTAGAGCTGCTGTAATGGAGATGATGAGGCAGAGAGCTGCAGAAGTTGCCAACAATGCTGGATGA 5601 0.4206 MHIFQSDRLPNQAGSQLPGLTQLTGNALPPQMSNLYGLPRSSINMDPEFLMARSSMQERICDILLQRQPEPVTEVQRRKVRDLAKRLEEGMLKSARSKEDYMNLETLETRLSNFLRRASMNNHNQQYPQLAGSSPIGTMIPTPGMLHVLNSSMVVTSSMDTSMIAATRCNSLVSTSFNSVSMLPAGGMFGSSLNRSDCLSNGYQQSTASFSIGSGTNMSSIGVHRTGSQMIPTPRFNVSSNHSNMTMDSSTNSSAFSGVDSTMVPQTQLQQQKQHIGGQNSHVLQNLGRQMGNGMRSGLLQKSFANSNGAINGGLGLIGNNTANEPSTSDGYASTYANSPKHLQQHFDQNQQTVVHDDGYGSNNVDTFASGNFYASATSSGSTMNTQNMNSVKLPSIPKTSSLIGGHSNLHGMQQAPHIKSEAVNQSEKLNFQPSLISREGLLHSQQQYQQRPQQFQQPEQYAQQQFQLKQQNQQPQHLVNNDTFIPSQIVANLESRVKSEPGVEHHKEVLNSHVSEQFHMSEMQSQFQQNMSEDCSGGGQHRSFPSGQHDITFSTPQNSQQMLHPDHQLVAESQNSFSSLTIGAQSKSVVPNQWPQSQDGNHIPGNISRDQHLQMDFHQRISGQDEAQCNNLSSDGSIIGQAAASRGSIELLDSGSAIKKAHKNQQRWLLFLLHARRCSAPEGRCQERFCSLAQKLCKHIDGCTLRHCPYPRCHHTRVLLHHFINCKDPCCPVCVFVRNYRRAFQLKHQIRPEAESSLPIAVNGSCKSYNIVSSSPRLISKPPVVVETSEYPHPSLKRVKVDHITQSDHPENDNRASSVSANCESHLARDAQSQAYPSVEMPISIKPELMEAKAEVPAHLVHEKLSEMEIDNNNADDKMPGGERVTYVEPPNLARTESTKTEKETGQGKQENVIPPSENAAGTKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKSKVEKNQALEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTMGAGDTRHYFCIPCYNDARSENINVDGTPIPKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIEEVERGERKPLPQSAVLGAKDLPKTILSDQIEQRLFRRLRQERQERARVQGKSYDEVPGADSLVVRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGSEAEFPNQRRVYLSYLDSVKYFRPEVRAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLRKAAKENVVADLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGHSDLSGNASKDLILMHKLGETISPMKEDFIMVHLQHACTHCCILMVSGNRWVCNQCKNFQICDKCYEAEIKREERERHPINQREKHSLHRVEITDIPVDTKDKDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVATCNICCLDIETGQGWRCEVCPEYDVCNGCYQKDGGIDHPHKLTNHPSIADRDAQNKEAREVRVLQYLCTTGRARVTSQDKILGGFGRRSPRNIFRRNDFHRSDLNRLLGWDICGFEGFHECNEIVKANMEGKIIPDEGTKRGKRNVYMLAKGRKINTGNLNQVEHIEDEDGKVLRPGLELNPLVADSDGARLHDLDGTVHFTRFQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESQCHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG 1866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0012 1866 Gene3D - 1424 1486 IPR043145 -
Lal18g0012 1866 Gene3D - 1547 1598 IPR043145 -
Lal18g0012 1866 SUPERFAMILY TAZ domain 1754 1833 IPR035898 -
Lal18g0012 1866 Pfam Histone acetylation protein 1151 1368 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lal18g0012 1866 SUPERFAMILY RING/U-box 1408 1477 - -
Lal18g0012 1866 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1045 1093 IPR013083 -
Lal18g0012 1866 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1110 1546 IPR031162 GO:0004402
Lal18g0012 1866 SUPERFAMILY FYVE/PHD zinc finger 1054 1094 IPR011011 -
Lal18g0012 1866 CDD PHD_HAC_like 1020 1092 - -
Lal18g0012 1866 MobiDBLite consensus disorder prediction 873 930 - -
Lal18g0012 1866 PANTHER CBP/P300-RELATED 119 1617 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lal18g0012 1866 PANTHER CBP/P300-RELATED 1755 1864 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lal18g0012 1866 Gene3D TAZ domain 655 743 IPR035898 -
Lal18g0012 1866 Pfam PHD-finger 1051 1093 IPR019787 -
Lal18g0012 1866 ProSitePatterns Zinc finger PHD-type signature. 1021 1092 IPR019786 -
Lal18g0012 1866 Pfam Zinc finger, ZZ type 1549 1589 IPR000433 GO:0008270
Lal18g0012 1866 SUPERFAMILY RING/U-box 1529 1596 - -
Lal18g0012 1866 ProSiteProfiles Zinc finger TAZ-type profile. 657 738 IPR000197 -
Lal18g0012 1866 ProSiteProfiles Zinc finger TAZ-type profile. 1750 1831 IPR000197 -
Lal18g0012 1866 ProSiteProfiles Zinc finger ZZ-type profile. 1548 1601 IPR000433 GO:0008270
Lal18g0012 1866 SMART KAT11_2 1143 1440 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lal18g0012 1866 ProSitePatterns Zinc finger ZZ-type signature. 1553 1580 IPR000433 GO:0008270
Lal18g0012 1866 Gene3D TAZ domain 1751 1862 IPR035898 -
Lal18g0012 1866 PANTHER HISTONE ACETYLTRANSFERASE HAC12 1755 1864 - -
Lal18g0012 1866 PANTHER HISTONE ACETYLTRANSFERASE HAC12 119 1617 - -
Lal18g0012 1866 ProSiteProfiles Zinc finger ZZ-type profile. 1428 1491 IPR000433 GO:0008270
Lal18g0012 1866 MobiDBLite consensus disorder prediction 1374 1398 - -
Lal18g0012 1866 SUPERFAMILY TAZ domain 662 742 IPR035898 -
Lal18g0012 1866 Pfam TAZ zinc finger 667 735 IPR000197 -
Lal18g0012 1866 Pfam TAZ zinc finger 1758 1828 IPR000197 -
Lal18g0012 1866 SMART TAZ_2 1751 1829 IPR000197 -
Lal18g0012 1866 SMART TAZ_2 660 738 IPR000197 -
Lal18g0012 1866 SMART zz_5 1427 1471 IPR000433 GO:0008270
Lal18g0012 1866 SMART zz_5 1547 1593 IPR000433 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0012 Lal-Chr18 83701 99162 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Lal18g0012 HAT_KAT11 9.6e-30 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0012 K04498 - gmx:100787114 2624.74