LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal18g0010	ATGTGGTTTCCTAATACAAAGGCATCAGTTATTAGAAAAGGAGGAAATGGATTGGTGGCAGTTGCTGTAGATAAGGATAACAAAGGGAGCAGACATGCTCTCAAATGGGCTGCTGATAGTCTTCTTTCAAGAGGCCAAACTCTTGTCTTAATCCATGTTCTGCACACCAAGTCCCCACTTGTTTCTTCAGGAGGCAGGGAGGCCATAATATGTAACAGCATTAGCCCGAATGCATCTCCACATAGAGAGGAACTTGTCAGTATTACAAAGGATCTCTTCCACACCTTTCATTGTTATTGTACTCGCAAAGATATTCAATGCCTTGATGTCTTACTTGAAGACACTGACGTTGTCAAAGGAATAACAGAATATGTCTCTTATGCTGCAATTGAGAACTTGGTGCTTGGTGCAGCATCAAGGCATGGCTTTATTAGATTCAAGTCATCAAGTAAACCAAGCAGTATAGCAAAGGGGTCACCAGATTTCTGTACAGTGTATGTGATTTCGAAGGGGAAAATATCTTCAGTCCGGAGTGCTTCTCGTGCAGCCCCAGATGGGTCCCCACTGCTGAAACATATACAGAATTTTAACAATGAGAATAATCCCAAGATATCCTCCTCTAGACATATGATTATGGGCTCCAGAGATCATCACAGGACACCTATCAAACCTCACAGTTGGCAGGATGAATCCATTAAGTCACAATTTGGAAAAAGAATAGGGTTGAGTGGAAGGTCATGCATGGACTACTCAGAATCTGACACGGATATATCATTTGTAAGCTCTGAGAGGCCTAGCACTAGCACTGGACGTTCATCATCTGTTTACACTGACTATATTGATTCAGGCCGCAATTCACGAACTTCAACCAGTTCAGATCGTAGTTTGGGTACTGGATTCATGTTCACTGACCTTACTTCACAAGATCTTTCATTTTCAAAGGAAAGTAGCATAACATCATCTTCACATTCATATCAGAACATGGATGAAGCAGAGGTTGATATGAGGAGGTTGAGGCTTGAGTTAAAGCAAGTGATGGAAATGTATGGTGCAGCATGCAAAGAAGCACTAACAGCTCAACAAAAGTTATTGGAACTTAACAACCAAAGAACCGATGAAGAAAAAAAAGTAGATGAGGCACGGTTGGCCCAAGAAGCAGCACTTGCAACCGCAGAGAAAGAGAAAGCAAGAAGTAGAGCAGCCATGGAAACAATTGAAGTGGCCACAAAAGTTGTAGAGATGGAATCAAGTAGGAAGGTGAGTGTTAAAAGGGAAGCTCTTCAAGAAGCTGAAGAAATGAGGAAACTATTGAATGGTGTAGACCTTGCTGGTGAAAGATATAAGAGATACACTATTGAGGAGATTGAAATAGCCACAGACTACTTTTCGGAATCTCTAAAAATAGGGGAAGGAGGCTATGGCCCTGTCTATAAATGTTACCTTGATGACATTCCAGTGGCTGTTAAGGTTCTGCGTCCTGATTCTACTCAAGGGAAATCACAGTTTCAAAAGGAGGTTGACATACTTAGCTGCATGAACCACCCTAACATGGTGTTTCTTCTAGGAGCCTGTCCAGAGCACAACATACTAATTTATGAGTACATGGAAAATGGAAGCTTAGAAGATTGTTTGTTTCTAAAGAAGGATGAAAATCTAATGTCTTGGCAGCTCAGGTTTCACATTGCTGCAGAGATAGCCACGGGCTTACTCTTCCTCCATGAAACAAAGCCCGAACCATTAGTGCACCGTGATCTCAAACCAAGCAACATTCTACTAGACCACAATTATGTAAGTAAGATTAGTGATGTTGGATTGGCCAGGATTCTCCCTGTTGTAGCTGAAAATGTAACTCAATGTCACATGACTTCAGCAGCTGGAACTTTTTGTTATATTGATCCAGAGTATCAGCAAACTGGAACAATCGGTGTTAAGTCCGATGTATATTCTCTAGGGATTATACTTCTTCAATTATTGACAGGTAGGCCACCAATGGGTTTGGCTTATCAGGTTGGAGAATCTATTGAGAATGATAAGTTTGTTGAAATGCTTGACAAATCTGTGCCTGAGTGGCCTCTTGAAGAAGCATTGTGTCTTGCAAAAGTAGCAGTCAAATGTGTAGAACTCAGACGAAAAGATCGACCAGACCTCGGCAAAGAAGTGTTGCCAGAGCTCCAAAAACTGAGAGAGTTTGCTGAAGATATCATGAGTCCAATCACCGACTTTTTTGGTGAAGATAACTGTAGTGAACCTTCCCCTAACCAGAGTCATGCTTCTATGCAACAGGATGTGATAAGTGAACCAAAGTTTGAACATTCAGAAAGTTCAACAAGTCCTTCAGCCTCATCAACACCAACACAAGGAGGAAACTCTGAATAA	2376	0.415	MWFPNTKASVIRKGGNGLVAVAVDKDNKGSRHALKWAADSLLSRGQTLVLIHVLHTKSPLVSSGGREAIICNSISPNASPHREELVSITKDLFHTFHCYCTRKDIQCLDVLLEDTDVVKGITEYVSYAAIENLVLGAASRHGFIRFKSSSKPSSIAKGSPDFCTVYVISKGKISSVRSASRAAPDGSPLLKHIQNFNNENNPKISSSRHMIMGSRDHHRTPIKPHSWQDESIKSQFGKRIGLSGRSCMDYSESDTDISFVSSERPSTSTGRSSSVYTDYIDSGRNSRTSTSSDRSLGTGFMFTDLTSQDLSFSKESSITSSSHSYQNMDEAEVDMRRLRLELKQVMEMYGAACKEALTAQQKLLELNNQRTDEEKKVDEARLAQEAALATAEKEKARSRAAMETIEVATKVVEMESSRKVSVKREALQEAEEMRKLLNGVDLAGERYKRYTIEEIEIATDYFSESLKIGEGGYGPVYKCYLDDIPVAVKVLRPDSTQGKSQFQKEVDILSCMNHPNMVFLLGACPEHNILIYEYMENGSLEDCLFLKKDENLMSWQLRFHIAAEIATGLLFLHETKPEPLVHRDLKPSNILLDHNYVSKISDVGLARILPVVAENVTQCHMTSAAGTFCYIDPEYQQTGTIGVKSDVYSLGIILLQLLTGRPPMGLAYQVGESIENDKFVEMLDKSVPEWPLEEALCLAKVAVKCVELRRKDRPDLGKEVLPELQKLREFAEDIMSPITDFFGEDNCSEPSPNQSHASMQQDVISEPKFEHSESSTSPSASSTPTQGGNSE	791

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal18g0010	791	Pfam	Protein kinase domain	464	691	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal18g0010	791	Gene3D	HUPs	6	168	IPR014729	-
	Lal18g0010	791	MobiDBLite	consensus disorder prediction	770	791	-	-
	Lal18g0010	791	PANTHER	BNAA05G18880D PROTEIN	15	770	-	-
	Lal18g0010	791	ProSiteProfiles	Protein kinase domain profile.	462	742	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal18g0010	791	Gene3D	Phosphorylase Kinase; domain 1	437	534	-	-
	Lal18g0010	791	PANTHER	OS02G0152300 PROTEIN	15	770	-	-
	Lal18g0010	791	Gene3D	Transferase(Phosphotransferase) domain 1	535	739	-	-
	Lal18g0010	791	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	580	592	IPR008271	GO:0004672\|GO:0006468
	Lal18g0010	791	SUPERFAMILY	Protein kinase-like (PK-like)	446	717	IPR011009	-
	Lal18g0010	791	MobiDBLite	consensus disorder prediction	741	791	-	-
	Lal18g0010	791	MobiDBLite	consensus disorder prediction	746	762	-	-
	Lal18g0010	791	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	20	168	-	-
	Lal18g0010	791	SMART	serkin_6	462	731	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal18g0010	791	Coils	Coil	388	408	-	-
	Lal18g0010	791	Coils	Coil	354	383	-	-
	Lal18g0010	791	Pfam	Universal stress protein family	19	159	IPR006016	-
	Lal18g0010	791	CDD	STK_N	18	171	-	-
	Lal18g0010	791	Coils	Coil	328	348	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal18g0010	Lal-Chr18	71957	76308	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal18g0010	1	766	Receptor kinase-like Gene Family	AT1G78940	51.269	0.0	741

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Lal18g0010		Pkinase	1e-41	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal18g0010	-		-	lang:109357274	1188.71